DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPT1 and pdf1

DIOPT Version :10

Sequence 1:NP_000301.1 Gene:PPT1 / 5538 HGNCID:9325 Length:306 Species:Homo sapiens
Sequence 2:NP_595325.2 Gene:pdf1 / 2540904 PomBaseID:SPBC530.12C Length:622 Species:Schizosaccharomyces pombe


Alignment Length:278 Identity:89/278 - (32%)
Similarity:150/278 - (53%) Gaps:15/278 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    33 LPLVIWHGMGDSCCNPLS--MGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTV 95
            ||:|||||:||:   |.|  :..:.:.|:|...|. |.::.:|....||::..:...:..|:..|
pombe    45 LPVVIWHGLGDT---PTSFTLTEVSQRVQKLTKGA-VYAIRVGDNEFEDIKAGYLGKLEDQLDEV 105

Human    96 CQALAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMINLISVGGQHQGVFGLPRCPGESSHIC 160
            |..:..:..|..|:.|:|.||||.||||:||.|.:..:.:||::|..|.|:..:|.| ..::.||
pombe   106 CDLIGNEDSLSNGFYALGLSQGGLFLRALAQTCDAAKIRSLITLGSPHSGINTIPGC-SPTNLIC 169

Human   161 D-FIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGINESYKKNLMALKK 224
            . .:...|..|.:...:|..:|||:|:....:.|.|..::.||..:|.| .::::|.:|:..||:
pombe   170 KAVVHSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNE-VLHDNYTRNIEKLKE 233

Human   225 ---FVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDNAGQLVFLATE 286
               .|.|.|..|.||:|..|..||:... ...|.|.:::..||  :.||||::.|.|:|..::..
pombe   234 LDNLVAVSFERDDIVEPPYSTGFGWINE-TTGENIEMEDFVLY--ESLGLKDLVNQGKLETISFP 295

Human   287 GDHLQLSEEWFYAHIIPF 304
            |.|||:....|.|.::.:
pombe   296 GRHLQMRWGDFDALVLKY 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPT1NP_000301.1 Palm_thioest 34..289 CDD:460441 83/260 (32%)
pdf1NP_595325.2 Palm_thioest 46..298 CDD:460441 83/260 (32%)
PAP2_dolichyldiphosphatase 415..568 CDD:239477
Blue background indicates that the domain is not in the aligned region.

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