Sequence 1: | NP_060960.2 | Gene: | LGR4 / 55366 | HGNCID: | 13299 | Length: | 951 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285192.1 | Gene: | Lgr4 / 5740505 | FlyBaseID: | FBgn0085440 | Length: | 809 | Species: | Drosophila melanogaster |
Alignment Length: | 846 | Identity: | 190/846 - (22%) |
---|---|---|---|
Similarity: | 293/846 - (34%) | Gaps: | 260/846 - (30%) |
- Green bases have known domain annotations that are detailed below.
Human 33 CSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIH 97
Human 98 PKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Human 163 NSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNL 227
Human 228 ETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAF 292
Human 293 HNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRD 357
Human 358 LPSFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSF 422
Human 423 NELTSFPTEG---LNGLNQLKLVGN-FKLKEALAAKDFVNLRSLSVPYAYQCCAFWGCDSYANLN 483
Human 484 TEDNSLQDHSVAQEKGTADAANVTSTLENEEHSQIIIHCTPSTGAFKPCEYLLGSWMIRLTVWFI 548
Human 549 FLVALFFNLLVIL-TTFASCTSLPSSKLFIGLISVSNLFMGIYTGILTFLDAVSWGRFAEFGIWW 612
Human 613 ETGSGCKVAGFLAVFSSESAIFLLMLATVERSLSAKDIMKNGKSNHLKQFRVAALLAFL-----G 672
Human 673 ATVAGCFPLFHRGE--YSASPLCL------PFPTG-ETPSLGFTVTLVLLNSLAFLLMAVIYTKL 728
Human 729 YCNLEKEDLSENSQSSMIKHV-----AWLIFTNCIFFCPVAFFSFAPLITAISISPEIMKSVTLI 788
Human 789 FFPLPACLNPVLYVFFNPKFKEDWKLLKR-------------------RVTKKSGSVSVSISSQG 834
Human 835 G 835 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LGR4 | NP_060960.2 | LRRNT | 29..56 | CDD:279764 | 9/22 (41%) |
LRR_RI | <44..239 | CDD:238064 | 53/194 (27%) | ||
LRR 1 | 58..79 | 2/20 (10%) | |||
leucine-rich repeat | 59..82 | CDD:275380 | 2/22 (9%) | ||
LRR 2 | 82..103 | 7/20 (35%) | |||
LRR_8 | 83..141 | CDD:290566 | 16/57 (28%) | ||
leucine-rich repeat | 83..106 | CDD:275380 | 9/22 (41%) | ||
LRR 3 | 106..127 | 4/20 (20%) | |||
leucine-rich repeat | 107..130 | CDD:275380 | 4/22 (18%) | ||
LRR 4 | 130..151 | 3/20 (15%) | |||
LRR_8 | 131..189 | CDD:290566 | 17/57 (30%) | ||
leucine-rich repeat | 131..154 | CDD:275380 | 3/22 (14%) | ||
LRR 5 | 154..177 | 9/22 (41%) | |||
leucine-rich repeat | 155..178 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 177..237 | CDD:290566 | 22/59 (37%) | ||
LRR 6 | 178..199 | 6/20 (30%) | |||
leucine-rich repeat | 179..202 | CDD:275380 | 8/22 (36%) | ||
LRR 7 | 202..223 | 6/20 (30%) | |||
leucine-rich repeat | 203..226 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 221..426 | CDD:238064 | 37/204 (18%) | ||
LRR 8 | 226..247 | 7/20 (35%) | |||
leucine-rich repeat | 227..249 | CDD:275380 | 6/21 (29%) | ||
LRR_8 | 248..305 | CDD:290566 | 5/56 (9%) | ||
LRR 9 | 249..270 | 5/20 (25%) | |||
leucine-rich repeat | 250..273 | CDD:275380 | 5/22 (23%) | ||
LRR 10 | 273..294 | 0/20 (0%) | |||
leucine-rich repeat | 274..295 | CDD:275380 | 0/20 (0%) | ||
LRR 11 | 320..341 | 1/20 (5%) | |||
LRR 12 | 344..365 | 7/20 (35%) | |||
LRR_8 | 345..401 | CDD:290566 | 15/55 (27%) | ||
leucine-rich repeat | 345..366 | CDD:275380 | 7/20 (35%) | ||
LRR 13 | 366..387 | 3/20 (15%) | |||
leucine-rich repeat | 367..390 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 390..444 | CDD:290566 | 16/56 (29%) | ||
LRR 14 | 390..411 | 7/20 (35%) | |||
leucine-rich repeat | 391..414 | CDD:275380 | 8/22 (36%) | ||
LRR 15 | 414..435 | 5/23 (22%) | |||
leucine-rich repeat | 415..438 | CDD:275380 | 6/25 (24%) | ||
leucine-rich repeat | 439..461 | CDD:275380 | 7/22 (32%) | ||
7tm_1 | 556..801 | CDD:278431 | 67/264 (25%) | ||
Lgr4 | NP_001285192.1 | Ldl_recept_a | 87..124 | CDD:278486 | |
LRR_RI | <184..397 | CDD:238064 | 77/356 (22%) | ||
LRR_8 | 188..248 | CDD:290566 | 22/81 (27%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 6/30 (20%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 261..320 | CDD:290566 | 22/71 (31%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 284..325 | CDD:289563 | 17/62 (27%) | ||
leucine-rich repeat | 286..309 | CDD:275380 | 7/22 (32%) | ||
LRR_4 | 308..348 | CDD:289563 | 22/154 (14%) | ||
leucine-rich repeat | 310..334 | CDD:275380 | 13/90 (14%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 11/70 (16%) | ||
LRR_8 | 356..416 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 358..381 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 381..421 | CDD:289563 | 11/39 (28%) | ||
leucine-rich repeat | 382..405 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 406..427 | CDD:275380 | 7/20 (35%) | ||
7tm_1 | 483..741 | CDD:278431 | 67/265 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |