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Protein Alignment hmg20b and Dsp1
DIOPT Version :9
Sequence 1: | NP_001018387.1 |
Gene: | hmg20b / 553572 |
ZFINID: | ZDB-GENE-030131-4258 |
Length: | 301 |
Species: | Danio rerio |
Sequence 2: | NP_001138203.1 |
Gene: | Dsp1 / 117294 |
FlyBaseID: | FBgn0278608 |
Length: | 397 |
Species: | Drosophila melanogaster |
Alignment Length: | 123 |
Identity: | 44/123 - (35%) |
Similarity: | 66/123 - (53%) |
Gaps: | 5/123 - (4%) |
- Green bases have known domain annotations that are detailed below.
Zfish 13 ASKDSQQTDSPQEENQSTSQPVKKRGWPKGKKRKKVL-PNGPKAPVTGYVRFLNERREHIRALHP 76
|.||.|: .|.......|.|.....:|||||::. ||.||..::.:..|.|:.|..::||:|
Fly 238 AEKDKQR----YEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNP 298
Zfish 77 DLPFPEITKRLGAEWSRLAPHDKQRYLDEAERDKMQYARELREYQKSEAYQITCAKVQ 134
:....:|.|.||.:||.:.|..||:|...|||||.:|.||:.||:.|....::...:|
Fly 299 EFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 356
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3288 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.840 |
|
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