DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STRBP and stau

DIOPT Version :10

Sequence 1:NP_060857.2 Gene:STRBP / 55342 HGNCID:16462 Length:672 Species:Homo sapiens
Sequence 2:NP_476751.1 Gene:stau / 37065 FlyBaseID:FBgn0003520 Length:1026 Species:Drosophila melanogaster


Alignment Length:649 Identity:134/649 - (20%)
Similarity:204/649 - (31%) Gaps:249/649 - (38%)


- Green bases have known domain annotations that are detailed below.


Human   110 KDKPTETLLNTVKDNLPIQIQ-KLTEEKYQVEQCVNEASIIIRNTKEPTLTLKVILTSPLIRDEL 173
            |||....|:|.:.....|..| :||||:...            :.|..|:||       ::.||.
  Fly   308 KDKTPMCLVNELARYNKITHQYRLTEERGPA------------HCKTFTVTL-------MLGDEE 353

Human   174 EKKDG---------------ENVSMKDPPDLLDRQK-------------CLNALASLRHAKWFQA 210
            ...||               |....|.||..:.|.:             .|||||.....:.|  
  Fly   354 YSADGFKIKKAQHLAASKAIEETMYKHPPPKIRRSEEGGPMRTHITPTVELNALAMKLGQRTF-- 416

Human   211 RANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLE-----------LICEKSIGTCNRPLGAGEAL 264
                         .|.|     ||..|    |.:           |:.....|....|.....||
  Fly   417 -------------YLLD-----PTQIP----PTDSIVPPEFAGGHLLTAPGPGMPQPPPPPAYAL 459

Human   265 RRVMECLASGIL-LPGGP----GLHDPCER---------------------------------DP 291
            |   :.|.:|.: :|..|    ..|.|.:|                                 .|
  Fly   460 R---QRLGNGFVPIPSQPMHPHFFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPP 521

Human   292 TDALSYMTIQQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWSVTDKEGAGSSALK 356
            :....::..|:...|..:.|.| :..|..:..:||:...:                     ||.:
  Fly   522 SKITLFVGKQKFVGIGRTLQQA-KHDAAARALQVLKTQAI---------------------SASE 564

Human   357 RPFEDGL--GDDKDPNKK-----MKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVH 414
            ...||.:  ||.|.|..:     :|||:.                       :.:|:|.:.||.|
  Fly   565 EALEDSMDEGDKKSPISQVHEIGIKRNMT-----------------------VHFKVLREEGPAH 606

Human   415 APVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMG-----YPTGFDADIECMSSDEKSDNES 474
            ...|..:..|.....|..|..||.:|...|.|:|..:.     .||                .::
  Fly   607 MKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPT----------------KQT 655

Human   475 KNETVSSNSSNNTGNSTTETSSTLEVRTQGPILTASGK---------------------NPVMEL 518
            ..:.:...:...:|.:..|.|  :...|.||  |.:||                     ||:.:|
  Fly   656 PLKRIKVKTPGKSGAAAREGS--VVSGTDGP--TQTGKPERRKRLNPPKDKLIDMDDADNPITKL 716

Human   519 NEKRRGLK-----YELISETGGSHDKR--FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFS 576
            .:.::..|     :|||::.|....:|  |||||...|...||.|.:||:||.:||.|..|.|.:
  Fly   717 IQLQQTRKEKEPIFELIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFELLEA 781

Human   577 GPNAANNKKKKIIPQAKGVVNTAVSA-AVQAVRGRGRGTLTRGAFVGATAAPGYIAPGYGTPYG 639
            ......|:.:.....:.....:||:| ||:|                  .|.|.: |...||.|
  Fly   782 VQVTPTNETQSSEECSTSATMSAVTAPAVEA------------------TAEGKV-PMVATPVG 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STRBPNP_060857.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..73
DZF 81..334 CDD:128842 57/301 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 349..371 8/23 (35%)
DSRM_STRBP_rpt1 384..467 CDD:380738 17/87 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..499 3/32 (9%)
DSRM_STRBP_rpt2 512..575 CDD:380740 27/90 (30%)
stauNP_476751.1 DSRM_STAU_rpt1 311..373 CDD:380686 16/80 (20%)
DSRM_STAU_rpt2 473..553 CDD:380687 10/80 (13%)
DSRM_STAU_rpt3 579..643 CDD:380688 19/86 (22%)
DSRM_STAU_rpt4 711..780 CDD:380689 26/68 (38%)
DSRM_STAU_rpt5 952..1019 CDD:380690
Blue background indicates that the domain is not in the aligned region.

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