DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STRBP and loqs

DIOPT Version :10

Sequence 1:NP_060857.2 Gene:STRBP / 55342 HGNCID:16462 Length:672 Species:Homo sapiens
Sequence 2:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster


Alignment Length:344 Identity:87/344 - (25%)
Similarity:126/344 - (36%) Gaps:96/344 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   257 PLGAGEALRR---VMECLASGILLPGGPGLHDPCERDPTDALSYMTIQ-QKEDITHSAQHALRLS 317
            |:..|.|.||   .:..|.:|..:.|.|....|        |....:: :||.|  |||.| :||
  Fly    29 PVQTGFAPRRHYNNLVGLGNGNAVSGSPVKGAP--------LGQRHVKLKKEKI--SAQVA-QLS 82

Human   318 AFGQIYKVLEMDP------------------LPSSKPFQKYSWSVTDKEGAGSSALKRPFEDGLG 364
            ..||:......||                  |||.:..:..  |.||..|.   |:|.|      
  Fly    83 QPGQLQLSDVGDPALAGGSGLQGGVGLMGVILPSDEALKFV--SETDANGL---AMKTP------ 136

Human   365 DDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSV---DVDG 426
                                 :.::..|:....|.||  |:|:...|.:|.|.|...|   |.| 
  Fly   137 ---------------------VSILQELLSRRGITPG--YELVQIEGAIHEPTFRFRVSFKDKD- 177

Human   427 TTYEA--SGPSKKTAKLHVAVKVLQAMGYPTGFDADIECMSSDEKSDNESKNET-VSSNSSNNTG 488
            |.:.|  :|.|||.|| |.|.:.|        .|..|.....:..|.:...:.| ::...|...|
  Fly   178 TPFTAMGAGRSKKEAK-HAAARAL--------IDKLIGAQLPESPSSSAGPSVTGLTVAGSGGDG 233

Human   489 NSTTETSSTLEVRTQGPILTASGKNPVMELNE---KRR--GLKYELISETGGSHDKRFVMEVEVD 548
            |:..........:|.|        ||:..|.|   :||  ...||..:|.|..|::.|.:...:.
  Fly   234 NANATGGGDASDKTVG--------NPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSIL 290

Human   549 GQKFRGAGPNKKVAKASAA 567
            ..:..|.|.:||:||..||
  Fly   291 NYREMGKGKSKKIAKRLAA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STRBPNP_060857.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..73
DZF 81..334 CDD:128842 26/98 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 349..371 4/21 (19%)
DSRM_STRBP_rpt1 384..467 CDD:380738 26/87 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..499 5/33 (15%)
DSRM_STRBP_rpt2 512..575 CDD:380740 20/61 (33%)
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691 27/110 (25%)
DSRM_PRKRA-like_rpt2 250..316 CDD:380692 20/60 (33%)
DSRM_PRKRA-like_rpt3 393..463 CDD:380693
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.