DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXW7 and sel-10

DIOPT Version :10

Sequence 1:NP_361014.1 Gene:FBXW7 / 55294 HGNCID:16712 Length:707 Species:Homo sapiens
Sequence 2:NP_506421.1 Gene:sel-10 / 179878 WormBaseID:WBGene00004767 Length:587 Species:Caenorhabditis elegans


Alignment Length:638 Identity:269/638 - (42%)
Similarity:366/638 - (57%) Gaps:106/638 - (16%)


- Green bases have known domain annotations that are detailed below.


Human   106 GEQDEEDEEEEEMDQESDDFDQSDDSSREDEHTHTNSVTNSSSIVDLPVHQLSSPFYTKTTKMKR 170
            |....||:|    ....:|.:.:|:.   :|.:::|..::|.:     ..:|||     :..::.
 Worm    12 GSMTPEDQE----PVTDNDMEYNDNG---EESSYSNGSSSSYN-----ADKLSS-----SRPLQH 59

Human   171 KLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQ 235
            |||                            .||:|:...||...                  ::
 Worm    60 KLD----------------------------LSASPSRNNDLNPR------------------VE 78

Human   236 EWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKD 300
            ..:.:|:..|..|::.|...|:.....|.::.:..:|||.|||||:|.||.||.:.:|..|...|
 Worm    79 HLIALFKDLSSAEQMDAFTRLLQESNMTNIRQLRAIIEPHFQRDFLSCLPVELGMKILHNLTGYD 143

Human   301 LLQAAQTCRYWRILAEDNLLWREKCKEE----------------------GIDEPLHI------- 336
            ||:.||..:.|::::|.:.:|:....||                      |:..|.||       
 Worm   144 LLKVAQVSKNWKLISEIDKIWKSLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQPCDLNV 208

Human   337 -KRRKVIKPG--FIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGS 398
             :..|:.|.|  |..:..||.|:|..:|:.||....:....||:||:||||||:|...:.:|:||
 Worm   209 HRFLKLQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGS 273

Human   399 DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHT 461
            ||||||||....|:.:.||||||||||:||:..  ..|:|||||||:|||:...|..:|||.|||
 Worm   274 DDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHT 338

Human   462 STVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 526
            ||||||.:....:|:||||.||||||:|:|:.|..|.||.|||||||:||..||||.|||.||:|
 Worm   339 STVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIW 403

Human   527 DPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDV---ETGNCIHTLTGHQSLTSG 586
            :..|..|:.||.||.||||||.|:...  |.||||||||||||.   |...|:..|.||.|||||
 Worm   404 NAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG 468

Human   587 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ-FNKNFVITSSDDGTVKLWD 650
            |:|:.|||||.||||.|::|||..|.|:..|.|   |:||:|.|| |.:|.|.||||||||||||
 Worm   469 MQLRGNILVSCNADSHVRVWDIHEGTCVHMLSG---HRSAITSLQWFGRNMVATSSDDGTVKLWD 530

Human   651 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 703
            ::.|..||:||||:|||:||.:||:.:::|.|.|||||||.|||||:::||||
 Worm   531 IERGALIRDLVTLDSGGNGGCIWRLCSTSTMLACAVGSRNNTEETKVILLDFD 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXW7NP_361014.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..151 9/44 (20%)
F-box_FBXW7 264..322 CDD:438905 22/57 (39%)
WD40 311..692 CDD:441893 214/420 (51%)
WD 1 378..418 22/39 (56%)
WD40 repeat 384..419 CDD:293791 18/34 (53%)
WD 2 420..456 20/37 (54%)
WD40 repeat 425..459 CDD:293791 18/35 (51%)
WD 3 459..498 23/38 (61%)
WD40 repeat 464..498 CDD:293791 18/33 (55%)
WD 4 500..536 22/35 (63%)
WD40 repeat 505..538 CDD:293791 19/32 (59%)
WD 5 539..578 24/43 (56%)
WD40 repeat 544..578 CDD:293791 20/38 (53%)
WD 6 580..618 23/37 (62%)
WD40 repeat 586..618 CDD:293791 18/31 (58%)
WD 7 622..659 23/37 (62%)
WD40 repeat 627..649 CDD:293791 15/22 (68%)
sel-10NP_506421.1 F-box_SF 107..165 CDD:459239 22/57 (39%)
WD40 248..530 CDD:238121 169/284 (60%)
WD40 repeat 259..294 CDD:293791 18/34 (53%)
WD40 repeat 300..336 CDD:293791 18/35 (51%)
WD40 repeat 341..375 CDD:293791 18/33 (55%)
WD40 repeat 382..415 CDD:293791 19/32 (59%)
WD40 repeat 421..460 CDD:293791 20/38 (53%)
WD40 repeat 468..500 CDD:293791 18/31 (58%)
WD40 495..>572 CDD:475233 47/79 (59%)
WD40 repeat 506..529 CDD:293791 15/22 (68%)

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