DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRRC1 and CYR1

DIOPT Version :10

Sequence 1:NP_060684.4 Gene:LRRC1 / 55227 HGNCID:14307 Length:524 Species:Homo sapiens
Sequence 2:NP_012529.3 Gene:CYR1 / 853452 SGDID:S000003542 Length:2026 Species:Saccharomyces cerevisiae


Alignment Length:664 Identity:158/664 - (23%)
Similarity:245/664 - (36%) Gaps:207/664 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    14 VESIDKRHCSLVYVPEEIYR-----------------------YARSLEELLLDANQLRELPEQF 55
            :||:|..:.:.:::|.|...                       .|..|..|.|..|.:|::|...
Yeast   818 IESLDVSNNANIFLPLEFIESSIKLLSLRMVNIRASKFPSNITKAYKLVSLELQRNFIRKVPNSI 882

Human    56 FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRL 120
            .:|..|..|.|..||::.||........|..||:|.|:....||.|::|..|...|.|.|.:..|
Yeast   883 MKLSNLTILNLQCNELESLPAGFVELKNLQLLDLSSNKFMHYPEVINYCTNLLQIDLSYNKIQSL 947

Human   121 PES----------------------FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLL 163
            |:|                      ..|:.:|..|::....:.|:..|..||.||.   |.:|.:
Yeast   948 PQSTKYLVKLAKMNLSHNKLNFIGDLSEMTDLRTLNLRYNRISSIKTNASNLQNLF---LTDNRI 1009

Human   164 TYLPDSLTQLRRLE--------------------ELDLGNNEIYNLP-ESIGALLHLKDLWLDGN 207
            :...|:|.:||.||                    .|.|...::.::| |.:..|..|:.|.|:.|
Yeast  1010 SNFEDTLPKLRALEIQENPITSISFKDFYPKNMTSLTLNKAQLSSIPGELLTKLSFLEKLELNQN 1074

Human   208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI---------- 262
            .|:.|||||..|..|:.|.|:.|:||.:|.|:|.|.||..|.:..|.:....||:          
Yeast  1075 NLTRLPQEISKLTKLVFLSVARNKLEYIPPELSQLKSLRTLDLHSNNIRDFVDGMENLELTSLNI 1139

Human   263 ---------------------GKLKK-------------------------LSILKVDQNRLTQL 281
                                 .||.|                         |.:|.:..|..:.:
Yeast  1140 SSNAFGNSSLENSFYHNMSYGSKLSKSLMFFIAADNQFDDAMWPLFNCFVNLKVLNLSYNNFSDV 1204

Human   282 PEAVGECESLTELVLTENQLLTLP-KSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDN 345
            ...  :.||:|||.|:.|:|.||. .::.|...|..|..:.|:::|||.|:.....|:||.|..|
Yeast  1205 SHM--KLESITELYLSGNKLTTLSGDTVLKWSSLKTLMLNSNQMLSLPAELSNLSQLSVFDVGAN 1267

Human   346 RLTRIPAEVS---------QATELHVLDVAGNRLLHL----------PLS-LTAL-KLKALWLSD 389
            :|   ...:|         ...||..|:.:|||...:          .|| ||.| :||.|.|.|
Yeast  1268 QL---KYNISNYHYDWNWRNNKELKYLNFSGNRRFEIKSFISHDIDADLSDLTVLPQLKVLGLMD 1329

Human   390 -----------NQSQPLLTFQT----------DT----DYTTG------------EKILTCVLLP 417
                       |.:..|.|..:          ||    ||.:.            ::.|.|:   
Yeast  1330 VTLNTTKVPDENVNFRLRTTASIINGMRYGVADTLGQRDYVSSRDVTFERFRGNDDECLLCL--- 1391

Human   418 QLPSEPTCQENLPRCGALENLVNDVSDEAWNERAVNRVSAIRFVEDEKDEEDNETRTLLRRATPH 482
                ..:..:|......:..:|.|:.|:.          .||.:|...||.|:..:|.||.:...
Yeast  1392 ----HDSKNQNADYGHNISRIVRDIYDKI----------LIRQLERYGDETDDNIKTALRFSFLQ 1442

Human   483 PG-ELKHMKKTVEN 495
            .. |:..|..:|:|
Yeast  1443 LNKEINGMLNSVDN 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRRC1NP_060684.4 LRR 1 11..34 5/42 (12%)
PRK15370 <23..>125 CDD:185268 33/146 (23%)
LRR 2 35..58 7/22 (32%)
leucine-rich repeat 38..60 CDD:275380 7/21 (33%)
LRR 3 60..81 7/20 (35%)
leucine-rich repeat 61..83 CDD:275380 7/21 (33%)
LRR 4 83..105 8/21 (38%)
leucine-rich repeat 84..106 CDD:275380 9/21 (43%)
leucine-rich repeat 107..129 CDD:275380 8/43 (19%)
LRR 5 107..126 7/40 (18%)
LRR 6 127..149 4/21 (19%)
leucine-rich repeat 130..152 CDD:275380 6/21 (29%)
LRR 133..424 CDD:443914 103/426 (24%)
LRR 7 150..172 7/21 (33%)
leucine-rich repeat 153..175 CDD:275380 6/21 (29%)
LRR 8 173..196 8/43 (19%)
leucine-rich repeat 176..198 CDD:275380 7/42 (17%)
LRR 9 198..218 10/19 (53%)
leucine-rich repeat 199..221 CDD:275380 11/21 (52%)
LRR 10 219..242 10/22 (45%)
leucine-rich repeat 222..244 CDD:275380 10/21 (48%)
LRR 11 244..264 6/50 (12%)
leucine-rich repeat 245..267 CDD:275380 7/52 (13%)
LRR 12 265..288 5/47 (11%)
LRR 13 290..310 9/20 (45%)
leucine-rich repeat 291..313 CDD:275380 9/22 (41%)
LRR 14 311..334 7/22 (32%)
leucine-rich repeat 314..336 CDD:275380 7/21 (33%)
LRR 15 336..356 7/28 (25%)
LRR 16 357..380 10/33 (30%)
leucine-rich repeat 360..381 CDD:275380 10/32 (31%)
LRR 17 382..405 11/47 (23%)
CYR1NP_012529.3 MSCRAMM_ClfA 188..>366 CDD:468110
Ad_cyc_g-alpha 368..418 CDD:430040
RA_PHLPP_like 678..776 CDD:340473
leucine-rich repeat 796..817 CDD:275380
LRR 818..1252 CDD:443914 108/438 (25%)
leucine-rich repeat 818..839 CDD:275380 5/20 (25%)
leucine-rich repeat 840..864 CDD:275380 1/23 (4%)
leucine-rich repeat 865..887 CDD:275380 7/21 (33%)
leucine-rich repeat 888..910 CDD:275380 7/21 (33%)
leucine-rich repeat 911..933 CDD:275380 9/21 (43%)
leucine-rich repeat 934..956 CDD:275380 7/21 (33%)
leucine-rich repeat 957..978 CDD:275380 1/20 (5%)
leucine-rich repeat 979..1018 CDD:275380 12/41 (29%)
leucine-rich repeat 1019..1041 CDD:275380 4/21 (19%)
leucine-rich repeat 1042..1065 CDD:275380 5/22 (23%)
leucine-rich repeat 1066..1088 CDD:275380 11/21 (52%)
leucine-rich repeat 1089..1111 CDD:275380 10/21 (48%)
leucine-rich repeat 1167..1187 CDD:275380 0/19 (0%)
leucine-rich repeat 1191..1211 CDD:275380 3/21 (14%)
leucine-rich repeat 1236..1258 CDD:275380 7/21 (33%)
leucine-rich repeat 1259..1287 CDD:275380 7/30 (23%)
PP2C 1374..1617 CDD:395385 19/100 (19%)
CYCc 1613..1825 CDD:214485
Blue background indicates that the domain is not in the aligned region.

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