DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AVPR1A and AkhR

DIOPT Version :10

Sequence 1:XP_054228380.1 Gene:AVPR1A / 552 HGNCID:895 Length:421 Species:Homo sapiens
Sequence 2:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster


Alignment Length:356 Identity:103/356 - (28%)
Similarity:173/356 - (48%) Gaps:55/356 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    55 KLEIAVLAVTFAVAVLGNSSVL-LALHRTPRKTSRMHLFIRHLSLADLAVAFFQVLPQMCWDITY 118
            :|.|.|.::.|.::.:|||:|| |...|..|...|:.:.:.||::|||.|....:..::.|..|.
  Fly    39 RLSITVYSILFVISTIGNSTVLYLLTKRRLRGPLRIDIMLMHLAIADLMVTLLLMPMEIVWAWTV 103

Human   119 RFRGPDWLCRVVKHLQVFGMFASAYMLVVMTADRYIAVCHPLKTLQQPARRSRLMIAAAWVLSFV 183
            ::...|.:||::...:|||::.|:|::|.::.|||.|:..|||   :...|.|:|:|.||:.|.|
  Fly   104 QWLSTDLMCRLMSFFRVFGLYLSSYVMVCISLDRYFAILKPLK---RSYNRGRIMLACAWLGSVV 165

Human   184 LSTPQYFVFSMIEVNNVTKARDC--WATFIQPWGSRAYVTWMTGGIFVAPVVILGTCYGFICYNI 246
            .|.||.|:|.:.|...||....|  :.:|...:..:.|.......::..|:::...|||.|...|
  Fly   166 CSIPQAFLFHLEEHPAVTGYFQCVIFNSFRSDFDEKLYQAASMCSMYAFPLIMFIYCYGAIYLEI 230

Human   247 WCNVRGKTASRQSKGAEQAGVA--FQKGFLLAPCVSSVKSISRAKIRTVKMTFVIVTAYIVCWAP 309
            :         |:|:...:..:|  |::        |:...:||||.||:|||..||..:|:||.|
  Fly   231 Y---------RKSQRVLKDVIAERFRR--------SNDDVLSRAKKRTLKMTITIVIVFIICWTP 278

Human   310 FFIIQMWSVWDPMSVWTESE-----NPTI-TITALLGSLNSCCNPWIYMFFSGHLLQDCVQSFPC 368
            ::.|.||       .|.:..     ||.: ....:..|.|||.||.:|..:              
  Fly   279 YYTISMW-------YWLDKHSAGKINPLLRKALFIFASTNSCMNPLVYGLY-------------- 322

Human   369 CQNMKEKFNKEDTDSMSRRQTFYSNNRSPTN 399
              |::.:.| .:..|::.|.|..||....:|
  Fly   323 --NIRGRMN-NNNPSVNNRHTSLSNRLDSSN 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AVPR1AXP_054228380.1 7tmA_V1aR 55..362 CDD:320507 95/317 (30%)
TM helix 1 56..82 CDD:320507 10/26 (38%)
TM helix 2 89..116 CDD:320507 7/26 (27%)
TM helix 3 127..157 CDD:320507 12/29 (41%)
TM helix 4 169..190 CDD:320507 11/20 (55%)
TM helix 5 216..245 CDD:320507 6/28 (21%)
TM helix 6 287..317 CDD:320507 16/29 (55%)
TM helix 7 330..355 CDD:320507 9/25 (36%)
V1R_C 375..421 CDD:430355 7/25 (28%)
AkhRNP_995639.1 7tmA_AKHR 39..328 CDD:320504 96/331 (29%)
TM helix 1 40..66 CDD:320504 10/25 (40%)
TM helix 2 74..101 CDD:320504 7/26 (27%)
TM helix 3 112..142 CDD:320504 12/29 (41%)
TM helix 4 151..172 CDD:320504 11/20 (55%)
TM helix 5 200..229 CDD:320504 6/28 (21%)
TM helix 6 256..286 CDD:320504 17/36 (47%)
TM helix 7 298..323 CDD:320504 8/40 (20%)

Return to query results.
Submit another query.