DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC25A36 and PMP34

DIOPT Version :10

Sequence 1:XP_047304396.1 Gene:SLC25A36 / 55186 HGNCID:25554 Length:343 Species:Homo sapiens
Sequence 2:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster


Alignment Length:321 Identity:79/321 - (24%)
Similarity:138/321 - (42%) Gaps:69/321 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    46 ACGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAG--ASVNRVVSPGPLHCLKVILEKEG 108
            |.||.:......||:.|::|||...             ||  .|..:|:        |.|:..||
  Fly    23 AAGGCIAMSTFYPLDTVRSRLQLEE-------------AGDVRSTRQVI--------KEIVLGEG 66

Human   109 PRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNDVFDPDSTQVH-----MISAAMAGFTAITAT 168
            .:||:|||||.|..:..|..:||..:    ..|..|....|...|     ::..::||...:..|
  Fly    67 FQSLYRGLGPVLQSLCISNFVYFYTF----HALK
AVASGGSPSQHSALKDLLLGSIAGIINVLTT 127

Human   169 NPIWLIKTRLQL-------DARNRGERRMGAFECVRKVYQTDGLKGFYRGMSASYAGISETVIHF 226
            .|.|::.|||::       |..|:..:.:  .|.::.|.:.:|:.|.:.|...|...:|...:.|
  Fly   128 TPFWVVNTRLRMRNVAGTSDEVNKHYKNL--LEGLKYVAEKEGIAGLWSGTIPSLMLVSNPALQF 190

Human   227 VIYESIKQKLLEYKTASTMENDEESVKEASDFVGMMLAAATSKTCATTIAYPHEVVRTRLREE-- 289
            ::||.:|:.::.: |...|.:           :......|.:|..||.:.||.::|:|:.|..  
  Fly   191 MMYEMLKRNIMR
F-TGGEMGS-----------LSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSK 243

Human   290 ----------GTKYRSFFQTLSLLV---QEEGYGSLYRGLTTHLVRQIPNTAIMMATYELV 337
                      |:..|: ..||.|::   |.:|...|:|||...:::.:...|:|...||.:
  Fly   244 ESDSKPSTSAGSTPRT-ESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKI 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC25A36XP_047304396.1 Mito_carr 40..145 CDD:395101 29/100 (29%)
Mito_carr 146..240 CDD:395101 23/105 (22%)
Mito_carr 258..343 CDD:395101 24/95 (25%)
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 28/97 (29%)
Mito_carr 105..202 CDD:395101 22/98 (22%)
Mito_carr 214..303 CDD:395101 24/89 (27%)

Return to query results.
Submit another query.