DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF220 and rnf220

DIOPT Version :10

Sequence 1:NP_001363415.1 Gene:RNF220 / 55182 HGNCID:25552 Length:592 Species:Homo sapiens
Sequence 2:NP_001016196.1 Gene:rnf220 / 548950 XenbaseID:XB-GENE-485089 Length:301 Species:Xenopus tropicalis


Alignment Length:293 Identity:264/293 - (90%)
Similarity:281/293 - (95%) Gaps:1/293 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   300 RYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCNRPLAGSEQEMSRHVEHCLSKREGSCMA 364
            |.:||||||||||||||||||||||||||:|||||||::||:|||:|||||||.||:||| :||.
 Frog    10 REETFLRVRANRQTRLNARIGKMKRRKQDDGQVCPLCSQPLSGSEEEMSRHVELCLAKRE-TCMN 73

Human   365 EDDAVDIEHENNNRFEEYEWCGQKRIRATTLLEGGFRGSGFIMCSGKENPDSDADLDVDGDDTLE 429
            |||:||||:||.|||||||||||||||||||||||||||||:||..|||.|||||||||||||||
 Frog    74 EDDSVDIENENGNRFEEYEWCGQKRIRATTLLEGGFRGSGFVMCGSKENHDSDADLDVDGDDTLE 138

Human   430 YGKPQYTEADVIPCTGEEPGEAKEREALRGAVLNGGPPSTRITPEFSKWASDEMPSTSNGESSKQ 494
            |||.||||||:|||||||||||||||||||||||||.||||||.|||||||||||||||||||||
 Frog   139 YGKAQYTEADIIPCTGEEPGEAKEREALRGAVLNGGTPSTRITTEFSKWASDEMPSTSNGESSKQ 203

Human   495 EAMQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSRGDRYKCLICMDSYSMPLTSIQCWHV 559
            |.|||||||||||||||:||||||||||||:||||||||||||||||||||||:|||||||||||
 Frog   204 ETMQKTCKNSDIEKITEESAVTTFEALKARIRELERQLSRGDRYKCLICMDSYTMPLTSIQCWHV 268

Human   560 HCEECWLRTLGAKKLCPQCNTITAPGDLRRIYL 592
            |||||||||||||||||||||||:||||||:||
 Frog   269 HCEECWLRTLGAKKLCPQCNTITSPGDLRRVYL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF220NP_001363415.1 RNF220 217..470 CDD:464946 147/169 (87%)
RING-HC_RNF220 538..589 CDD:438225 48/50 (96%)
rnf220NP_001016196.1 RNF220 <9..179 CDD:464946 147/169 (87%)
RING-HC_RNF220 247..298 CDD:438225 48/50 (96%)

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