Protein Alignment RBM28 and lark

DIOPT Version :10

• Sequence 1: NP_060547.2
• Gene: RBM28 / 55131
• HGNCID: 21863
• Length: 759
• Species: Homo sapiens
• Sequence 2: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Alignment Length: 212
• Identity: 47/212 - (22%)
• Similarity: 88/212 - (41%)
• Gaps: 43/212 - (20%)

Human     6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEITTFEG 70
            ||:|.|....::.:|..||.:.|.|.:|.||        :.:|:|   .:|..|:....|....|
  Fly     9 LFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFV---HMETEQQGRDAIQNLNG 62

Human    71 CKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSFKCSEDDLKTVFA 135
            ..:|....|       .|..|:      ::.|.....|:       .:.||:.|....:::.:|.
  Fly    63 YTLNEFAIK-------VEAAKS------RRAPNTPTTKI-------FVGNLTDKTRAPEVRELFQ 107

Human   136 QFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWAVAKDKYK---- 196
            ::|.|:|.:|       :|.:|||....:.:...|:|.:|.:.:.|:.:.|..:.::.:.|
  Fly   108 KYGTVVECDI-------VRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMG 165

Human   197 DTQSVSAIGEEKSHESK 213
            |.:.....| ...|.||
  Fly   166 DPEQCYRCG-RSGHWSK 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RBM28	NP_060547.2	RRM1_RBM28_like	5..81	CDD:409847	20/74 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	84..105		3/20 (15%)
		RRM2_RBM28_like	115..190	CDD:409848	17/74 (23%)
		PABP-1234	126..721	CDD:130689	20/92 (22%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	201..330		4/13 (31%)
		RRM3_RBM28_like	335..417	CDD:409849
		RRM4_RBM28_like	487..581	CDD:409850
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	594..759
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/81 (25%)
		RRM1_2_CoAA_like	87..152	CDD:409779	17/78 (22%)
		hnRNP-R-Q	<88..>258	CDD:273732	23/109 (21%)