| Sequence 1: | NP_001350671.1 | Gene: | ATG16L1 / 55054 | HGNCID: | 21498 | Length: | 624 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006245481.1 | Gene: | Atg16l1 / 363278 | RGDID: | 1310631 | Length: | 623 | Species: | Rattus norvegicus |
| Alignment Length: | 623 | Identity: | 586/623 - (94%) |
|---|---|---|---|
| Similarity: | 605/623 - (97%) | Gaps: | 1/623 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEKHDVPN 65
Human 66 RHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRKDREMQMNEAK 130
Human 131 IAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKLRKTTEENQELVTRWM 195
Human 196 AEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRAI 260
Human 261 SRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAARRRSVSSFPVPQDNVDTHPGSGKEV 325
Human 326 RVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIE 390
Human 391 FDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLR 455
Human 456 SKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTEL 520
Human 521 LSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKV 585
Human 586 EKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQ 623 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ATG16L1 | NP_001350671.1 | ATG16 | 31..206 | CDD:312208 | 159/174 (91%) |
| WD40 | <272..390 | CDD:225201 | 107/117 (91%) | ||
| WD40 | 332..622 | CDD:238121 | 275/289 (95%) | ||
| WD40 repeat | 344..381 | CDD:293791 | 34/36 (94%) | ||
| WD40 repeat | 387..423 | CDD:293791 | 34/35 (97%) | ||
| WD40 repeat | 428..465 | CDD:293791 | 36/36 (100%) | ||
| WD40 repeat | 473..503 | CDD:293791 | 28/29 (97%) | ||
| WD40 repeat | 508..544 | CDD:293791 | 33/35 (94%) | ||
| WD40 repeat | 554..590 | CDD:293791 | 33/35 (94%) | ||
| WD40 repeat | 597..621 | CDD:293791 | 19/23 (83%) | ||
| Atg16l1 | XP_006245481.1 | ATG16 | 31..206 | CDD:285778 | 159/174 (91%) |
| RILP-like | <90..190 | CDD:304877 | 89/99 (90%) | ||
| WD40 | <332..589 | CDD:225201 | 247/256 (96%) | ||
| WD40 | 333..621 | CDD:238121 | 275/287 (96%) | ||
| WD40 repeat | 343..380 | CDD:293791 | 34/36 (94%) | ||
| WD40 repeat | 386..422 | CDD:293791 | 34/35 (97%) | ||
| WD40 repeat | 427..464 | CDD:293791 | 36/36 (100%) | ||
| WD40 repeat | 472..502 | CDD:293791 | 28/29 (97%) | ||
| WD40 repeat | 507..543 | CDD:293791 | 33/35 (94%) | ||
| WD40 repeat | 553..589 | CDD:293791 | 33/35 (94%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83679571 | |
| Domainoid | 1 | 1.000 | 349 | 1.000 | Domainoid score | I12839 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0288 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H41786 | |
| Inparanoid | 1 | 1.050 | 1131 | 1.000 | Inparanoid score | I4517 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG53779 | |
| OrthoDB | 1 | 1.010 | - | - | D111280at32523 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004186 | |
| OrthoInspector | 1 | 1.000 | - | - | oto138356 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103883 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR19878 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1444 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 17 | 17.310 | |||||