| Sequence 1: | NP_001350671.1 | Gene: | ATG16L1 / 55054 | HGNCID: | 21498 | Length: | 624 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001342709.1 | Gene: | prp17 / 2541168 | PomBaseID: | SPBC6B1.10 | Length: | 558 | Species: | Schizosaccharomyces pombe |
| Alignment Length: | 562 | Identity: | 113/562 - (20%) |
|---|---|---|---|
| Similarity: | 196/562 - (34%) | Gaps: | 178/562 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Human 158 ANQTLKDEYDALQITFTALEGKLRKTTEENQELVTRWMAEKAQEAN-------RLNAENE----K 211
Human 212 DSRRRQARLQKELAEAAKEPLPVEQDDDIE-----VIVDETSDHTE--ETSPVRAISRAATKRLS 269
Human 270 QPAGGLLDSITNIFGLSE-------SPLLGHHSSSDAA----------RRRSVSSFPVPQD---N 314
Human 315 VDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSP-GSRLLATGGMDRRVKLWEVFGEKCEFKGS 378
Human 379 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSG 443
Human 444 SHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCV------------MSGHFDKKIRFWDIRSE 496
Human 497 SIVREME-LLGKITALDLNPERTELLSCSRDDLLK------------VIDLRTNAIKQTFSAP-- 546
Human 547 ------------------------------GFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVL 581
Human 582 TGKVEKVLSK--QHSSSINAVAWSPSGSHVVS----VDKGCK 617 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ATG16L1 | NP_001350671.1 | ATG16 | 31..206 | CDD:312208 | 10/54 (19%) |
| WD40 | <272..390 | CDD:225201 | 28/138 (20%) | ||
| WD40 | 332..622 | CDD:238121 | 72/350 (21%) | ||
| WD40 repeat | 344..381 | CDD:293791 | 11/37 (30%) | ||
| WD40 repeat | 387..423 | CDD:293791 | 3/35 (9%) | ||
| WD40 repeat | 428..465 | CDD:293791 | 11/36 (31%) | ||
| WD40 repeat | 473..503 | CDD:293791 | 12/41 (29%) | ||
| WD40 repeat | 508..544 | CDD:293791 | 5/47 (11%) | ||
| WD40 repeat | 554..590 | CDD:293791 | 12/35 (34%) | ||
| WD40 repeat | 597..621 | CDD:293791 | 6/25 (24%) | ||
| prp17 | NP_001342709.1 | WD40 | 258..558 | CDD:238121 | 72/351 (21%) |
| WD40 repeat | 269..308 | CDD:293791 | 14/81 (17%) | ||
| WD40 repeat | 314..349 | CDD:293791 | 12/41 (29%) | ||
| WD40 repeat | 354..393 | CDD:293791 | 12/38 (32%) | ||
| WD40 repeat | 400..435 | CDD:293791 | 2/34 (6%) | ||
| WD40 repeat | 442..481 | CDD:293791 | 1/38 (3%) | ||
| WD40 repeat | 489..525 | CDD:293791 | 13/38 (34%) | ||
| WD40 repeat | 531..557 | CDD:293791 | 6/25 (24%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||