DRSC/TRiP Functional Genomics Resources

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Protein Alignment twist1b and CG33557

DIOPT Version :9

Sequence 1:NP_001017820.1 Gene:twist1b / 550518 ZFINID:ZDB-GENE-050417-357 Length:169 Species:Danio rerio
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:139 Identity:39/139 - (28%)
Similarity:61/139 - (43%) Gaps:30/139 - (21%)


- Green bases have known domain annotations that are detailed below.


Zfish    21 SNSDGEPDRPPKRCARKRRSSKKNGEDSDSSTLGKRGKKSSNSSNSPQSFEELQTQRVMANVRER 85
            |||.|.            .|......||:.|.:|:........:   |.....:..|...|.|||
  Fly    22 SNSSGS------------ASGSGAAADSEDSQIGQEANPGGQEN---QGNHRRRPPRQKINARER 71

Zfish    86 QRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLCQVL--------------QSDEL 135
            .||.::|.|:.|||.:|||.|.: |||||:.::||:.||..|...|              :|:.:
  Fly    72 YRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTECQPCLLHKYESEGI 136

Zfish   136 DSKMASCSY 144
            ..:::.|::
  Fly   137 TRRISICTF 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twist1bNP_001017820.1 HLH 76..126 CDD:278439 25/50 (50%)
CG33557NP_001014730.1 HLH 67..119 CDD:197674 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583743
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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