DRSC/TRiP Functional Genomics Resources

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Protein Alignment twist1b and CG33557

DIOPT Version :10

Sequence 1:NP_001017820.1 Gene:twist1b / 550518 ZFINID:ZDB-GENE-050417-357 Length:169 Species:Danio rerio
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:139 Identity:39/139 - (28%)
Similarity:61/139 - (43%) Gaps:30/139 - (21%)


- Green bases have known domain annotations that are detailed below.


Zfish    21 SNSDGEPDRPPKRCARKRRSSKKNGEDSDSSTLGKRGKKSSNSSNSPQSFEELQTQRVMANVRER 85
            |||.|.            .|......||:.|.:|:........:   |.....:..|...|.|||
  Fly    22 SNSSGS------------ASGSGAAADSEDSQIGQEANPGGQEN---QGNHRRRPPRQKINARER 71

Zfish    86 QRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLCQVL--------------QSDEL 135
            .||.::|.|:.|||.:|||.|.: |||||:.::||:.||..|...|              :|:.:
  Fly    72 YRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTECQPCLLHKYESEGI 136

Zfish   136 DSKMASCSY 144
            ..:::.|::
  Fly   137 TRRISICTF 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twist1bNP_001017820.1 bHLH_TS_TWIST1 65..141 CDD:381418 29/90 (32%)
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 26/53 (49%)

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