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Protein Alignment twist1b and CG33557
DIOPT Version :9
Sequence 1: | NP_001017820.1 |
Gene: | twist1b / 550518 |
ZFINID: | ZDB-GENE-050417-357 |
Length: | 169 |
Species: | Danio rerio |
Sequence 2: | NP_001014730.1 |
Gene: | CG33557 / 3346145 |
FlyBaseID: | FBgn0053557 |
Length: | 150 |
Species: | Drosophila melanogaster |
Alignment Length: | 139 |
Identity: | 39/139 - (28%) |
Similarity: | 61/139 - (43%) |
Gaps: | 30/139 - (21%) |
- Green bases have known domain annotations that are detailed below.
Zfish 21 SNSDGEPDRPPKRCARKRRSSKKNGEDSDSSTLGKRGKKSSNSSNSPQSFEELQTQRVMANVRER 85
|||.|. .|......||:.|.:|:........: |.....:..|...|.|||
Fly 22 SNSSGS------------ASGSGAAADSEDSQIGQEANPGGQEN---QGNHRRRPPRQKINARER 71
Zfish 86 QRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLCQVL--------------QSDEL 135
.||.::|.|:.|||.:|||.|.: |||||:.::||:.||..|...| :|:.:
Fly 72 YRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTECQPCLLHKYESEGI 136
Zfish 136 DSKMASCSY 144
..:::.|::
Fly 137 TRRISICTF 145
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twist1b | NP_001017820.1 |
HLH |
76..126 |
CDD:278439 |
25/50 (50%) |
CG33557 | NP_001014730.1 |
HLH |
67..119 |
CDD:197674 |
26/51 (51%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170583743 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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