| Sequence 1: | XP_005263140.1 | Gene: | HERC6 / 55008 | HGNCID: | 26072 | Length: | 1034 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_010745.3 | Gene: | TOM1 / 852068 | SGDID: | S000002865 | Length: | 3268 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 842 | Identity: | 183/842 - (21%) |
|---|---|---|---|
| Similarity: | 321/842 - (38%) | Gaps: | 195/842 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Human 298 DGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSK--PTHPEALT-ENFDISCLISAEDFVDVQ 359
Human 360 VKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSEIRMIFS 424
Human 425 SPACLTASFLKKRGTGETTSIDVDLEMARDTFKKLTKKEWISSMITTCLEDDLLRALPCHSPHQE 489
Human 490 ALSVFLLLPECP---------VMHDSKNWKNLVVPFAKAVCEMSKQSLQVLKKCW---------- 535
Human 536 --------AFLQESSL--NPLIQMLKAAIISQLLHQTKTEQDHCNVKALLGM------------- 577
Human 578 ---MKELHKVNKAN----------------CRLPENTFNIN-----ELSNLLNFYIDRGRQLFRD 618
Human 619 NHLIPAETPSPVIFSDFPFIFNSLSKIKLLQADSHIKM----------QMSEKKAYMLMHETIL- 672
Human 673 ----------QKKDEFPPSPRFILRVRRSRLVKDALRQLSQAEATDFCKV--------LVVEFIN 719
Human 720 EICPESGGVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKP---KPEKKRYFLF-GMLCGLS 780
Human 781 LFNLNVANLPFPLALYKKLLDQKPSLEDLKELSPRLGKSLQEVLDDAADDIGDALCIRFSIHWD- 844
Human 845 ---QNDVDLIPNGISIPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPE 906
Human 907 ELMTAIIGNTDYDWKQFEQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHAR 971
Human 972 GIQKMEIV-----FRCPETFSERDH-PTSITCHNILSLPKYSTMERMEEALQVAIN-NNRGF 1026 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC6 | XP_005263140.1 | RCC1_2 | 27..54 | CDD:290274 | |
| RCC1_2 | 89..118 | CDD:290274 | |||
| RCC1 | 105..155 | CDD:278826 | |||
| RCC1 | 158..208 | CDD:278826 | |||
| RCC1 | 215..263 | CDD:278826 | |||
| RCC1_2 | 250..279 | CDD:290274 | |||
| RCC1 | 266..313 | CDD:278826 | 3/14 (21%) | ||
| HECTc | 684..1026 | CDD:238033 | 103/364 (28%) | ||
| HECTc | 711..1026 | CDD:214523 | 96/337 (28%) | ||
| TOM1 | NP_010745.3 | DUF908 | 92..387 | CDD:399185 | |
| DUF913 | 448..>683 | CDD:399192 | |||
| MSCRAMM_ClfB | <1879..2061 | CDD:411414 | |||
| DUF4414 | 2328..2357 | CDD:405126 | |||
| HUL4 | 2385..3268 | CDD:227354 | 183/842 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||