DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZSCAN2 and znf1043

DIOPT Version :9

Sequence 1:XP_024305746.1 Gene:ZSCAN2 / 54993 HGNCID:20994 Length:645 Species:Homo sapiens
Sequence 2:XP_009299198.1 Gene:znf1043 / 565722 ZFINID:ZDB-GENE-080215-14 Length:476 Species:Danio rerio


Alignment Length:439 Identity:202/439 - (46%)
Similarity:252/439 - (57%) Gaps:22/439 - (5%)


- Green bases have known domain annotations that are detailed below.


Human   225 EDHGEVVSQDREVGQLIGLQGTYLGEKP--------------------YECPQCGKTFSRKSHLI 269
            |.||:  ::..|..|....|.....|||                    :.|.||..:||:||.|.
Zfish    36 ETHGQ--NEIDEKQQFQKPQEIMTDEKPTLTKKTSSHGRPQKSKSGCNFSCKQCRNSFSQKSKLD 98

Human   270 THERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTGE 334
            .|.|.||.|:.|.|::|||||.....|..|...||||..:.|::|||||.::.|...|.||||||
Zfish    99 VHMRVHTREQPYTCEQCGKSFGQIQGFKAHMRIHTGEGKFTCQECGKSFYQAGNFAAHMRIHTGE 163

Human   335 KPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYECKECG 399
            |||.|.:||||||:..||..|.|.||.|:||:|.:||||||...|...|..|||||..:.|:|||
Zfish   164 KPFSCKQCGKSFSQKSNLDVHMRVHTREQPYTCEQCGKSFGQIQSFKAHMRIHTGEGKFTCQECG 228

Human   400 ESFSYNSNLIRHQRIHTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQCSECGKSFSRSSNL 464
            :||....|...|.||||||||:.|..||:.|||.|.|..|.|.||.|:||.|.:||||||:..:.
Zfish   229 KSFYQAGNFAAHMRIHTGEKPFSCKQCGKSFSQKSNLDVHMRVHTREQPYTCEQCGKSFSQKQSF 293

Human   465 ATHRRTHMVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKPYECLTCGESFSWSSNLLKHQRIHTG 529
            .||.|.|..|||:.|..|||||.|..:|..|..:||||||:.|..||:||....:|..|.|||||
Zfish   294 NTHMRIHTGEKPFSCKQCGKSFFQKPNLDVHMRVHTGEKPHTCEQCGKSFGQKQDLYIHMRIHTG 358

Human   530 EKPYKCSECGKCFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRCPEC 594
            ||||.|:||||.|...|.|..|.|.||||||:.|..|||||:..:.|..|...|.|...:.|.:|
Zfish   359 EKPYTCTECGKSFPHISTLKHHMRIHTGEKPFACAQCGKSFTTKTSLKNHMNGHTGTIVFTCDQC 423

Human   595 GKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSNFITHQRTHMKEK 643
            ||..:....:..|.:.|:.|..::|.||||||.:..:..||.:.|..|:
Zfish   424 GKSLTRKDTIKKHMKTHSREDRFRCSECGKGFKSKRSLNTHMKLHNGEE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZSCAN2XP_024305746.1 SCAN 70..157 CDD:322011
COG5048 251..631 CDD:227381 191/399 (48%)
C2H2 Zn finger 255..275 CDD:275368 10/19 (53%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
C2H2 Zn finger 311..331 CDD:275368 9/19 (47%)
C2H2 Zn finger 339..359 CDD:275368 11/19 (58%)
C2H2 Zn finger 367..387 CDD:275368 9/19 (47%)
C2H2 Zn finger 395..415 CDD:275368 9/19 (47%)
C2H2 Zn finger 423..443 CDD:275368 10/19 (53%)
C2H2 Zn finger 451..471 CDD:275368 10/19 (53%)
C2H2 Zn finger 479..499 CDD:275368 9/19 (47%)
C2H2 Zn finger 507..527 CDD:275368 8/19 (42%)
C2H2 Zn finger 535..555 CDD:275368 10/19 (53%)
C2H2 Zn finger 563..583 CDD:275368 8/19 (42%)
C2H2 Zn finger 591..611 CDD:275368 5/19 (26%)
C2H2 Zn finger 619..639 CDD:275368 9/19 (47%)
znf1043XP_009299198.1 COG5048 67..468 CDD:227381 191/400 (48%)
C2H2 Zn finger 84..104 CDD:275368 10/19 (53%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
C2H2 Zn finger 140..160 CDD:275368 9/19 (47%)
zf-H2C2_2 152..177 CDD:290200 17/24 (71%)
C2H2 Zn finger 168..188 CDD:275368 11/19 (58%)
zf-H2C2_2 180..203 CDD:290200 13/22 (59%)
C2H2 Zn finger 196..216 CDD:275368 9/19 (47%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
zf-H2C2_2 236..261 CDD:290200 14/24 (58%)
C2H2 Zn finger 252..272 CDD:275368 10/19 (53%)
zf-H2C2_2 264..289 CDD:290200 14/24 (58%)
C2H2 Zn finger 280..300 CDD:275368 10/19 (53%)
zf-H2C2_2 292..315 CDD:290200 11/22 (50%)
C2H2 Zn finger 308..328 CDD:275368 9/19 (47%)
zf-H2C2_2 320..343 CDD:290200 11/22 (50%)
C2H2 Zn finger 336..356 CDD:275368 8/19 (42%)
zf-H2C2_2 348..371 CDD:290200 16/22 (73%)
C2H2 Zn finger 364..384 CDD:275368 10/19 (53%)
zf-H2C2_2 377..401 CDD:290200 15/23 (65%)
C2H2 Zn finger 392..412 CDD:275368 8/19 (42%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
C2H2 Zn finger 448..468 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I37261
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.