DRSC/TRiP Functional Genomics Resources

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Protein Alignment myot and zormin

DIOPT Version :10

Sequence 1:NP_001017159.2 Gene:myot / 549913 XenbaseID:XB-GENE-955641 Length:497 Species:Xenopus tropicalis
Sequence 2:NP_001261317.1 Gene:zormin / 2769001 FlyBaseID:FBgn0052311 Length:3664 Species:Drosophila melanogaster


Alignment Length:516 Identity:117/516 - (22%)
Similarity:189/516 - (36%) Gaps:103/516 - (19%)


- Green bases have known domain annotations that are detailed below.


 Frog    32 KCQVESTSQSTNEAVHTSRSPKKISISIQPQPCSSYNMSSAAPVAPSKCSKTEV-HLQPQSSNIA 95
            |.||:...:|.|:|.......:||....:.   .||..:|.:...|......|. :|.....|..
  Fly  1084 KDQVKQKRKSLNQATDFFEVVEKIDAEYRE---ISYFYTSVSNKVPYLRDSVEAGNLVNDIENYV 1145

 Frog    96 LSGQENDQSKNTSTAFLTISPSKSQS-------------KPKM-INTGTSNLPNASVKTDLRQ-- 144
            .|.:...:||..|.:......:|..|             |.|| ||.....|.....:.:.|:  
  Fly  1146 TSREAALRSKLDSASQCAHDMNKVSSLYNDVMNIFQSFIKLKMDINVVQERLKQEQRQKEQRERD 1210

 Frog   145 --DQHEYERGIQGT------------------KDALIQDLERKLKCKDSILHNGNQR------LT 183
              ||.|.|:.|:..                  :.|.|:..:|:|..::..|.....|      ..
  Fly  1211 ARDQAEREKAIKEAEAKERLHREEQSRLENQRQQAAIEQAQRELAARELALREQAVREEEARLQA 1275

 Frog   184 YEEKMARRLLGAENAASVFEDHMADSVQD---------SKQIRDSVTMPSLQQHEKHSRNRESTS 239
            ..|:..|..|..|.||.. |:....|::|         .:.|||..|....::.|:..|..||.|
  Fly  1276 IREQATREQLAREQAARE-EELRIQSLRDIARREEEVRLQNIRDEETRIRREEEERIRRENESRS 1339

 Frog   240 GSIQE-----------------------------------------KYFPPRFLQVPEDLTVEEG 263
            ...:|                                         :|..|.|.:..:|....||
  Fly  1340 KREEEARIQREEITRLQTLRDQVDQQRIVTENIRKDIQVNSIFTELRYASPLFTRPLKDAVSREG 1404

 Frog   264 HFCRIDFKVAGVPVPDVSWYLNGKAVQADDFHKFIVSEKGVHSFIFEVVKTYDAGLYKCVASNRA 328
            .....:.:|.|.|.|.|.|:.:|.::|.:..:| ...:||:...:.|.....|:..:.|.|||..
  Fly  1405 DRFVFECEVTGTPEPAVEWFKDGISIQTNSDYK-TTFDKGICRLVIEETFAADSARFSCRASNLV 1468

 Frog   329 GKSTFTLQLDV---LAQERKRPPCFIQKPAAIKAIEGENIKIECLISAIPQPQILLKKNNEMLRY 390
            |.......|.|   .|:.:..||..::...:.||.||.:.:..|:::.:|.|.:...||::.:..
  Fly  1469 GTCDTNATLSVRENAAEVQLVPPRILRFLQSGKATEGSSFQFACVVAGVPLPTVQWFKNDKCIDD 1533

 Frog   391 NTDRIRLYQDDSGRVSLVIYNVNKTDDGWYTISAVNEAGVATCHARLDVATIVNKQMPSVK 451
            :.|.:..|  ::|..:|....|...||..||.||.|.||:..|.|.|.|..:...::||.|
  Fly  1534 SPDYVISY--NNGEATLKFEEVFLEDDAVYTCSASNPAGIEHCSASLIVEPLEPTELPSFK 1592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myotNP_001017159.2 Ig 249..339 CDD:472250 24/89 (27%)
Ig strand B 266..270 CDD:409582 0/3 (0%)
Ig strand C 279..283 CDD:409582 1/3 (33%)
Ig strand E 305..309 CDD:409582 0/3 (0%)
Ig strand F 319..324 CDD:409582 1/4 (25%)
Ig strand G 332..335 CDD:409582 0/2 (0%)
IgI_Myotilin_C 348..439 CDD:409473 27/90 (30%)
Ig strand A 348..351 CDD:409473 1/2 (50%)
Ig strand A' 354..359 CDD:409473 0/4 (0%)
Ig strand B 364..371 CDD:409473 1/6 (17%)
Ig strand C 378..384 CDD:409473 0/5 (0%)
Ig strand C' 385..388 CDD:409473 0/2 (0%)
Ig strand D 395..401 CDD:409473 1/5 (20%)
Ig strand E 404..414 CDD:409473 2/9 (22%)
Ig strand F 418..426 CDD:409473 4/7 (57%)
Ig strand G 428..439 CDD:409473 5/10 (50%)
zorminNP_001261317.1 SPEC 126..332 CDD:238103
SPEC <504..641 CDD:413338
SMC_prok_B 654..>1389 CDD:274008 59/308 (19%)
Smc <1192..>1377 CDD:440809 32/185 (17%)
I-set 1390..1479 CDD:400151 24/89 (27%)
Ig strand B 1407..1411 CDD:409564 0/3 (0%)
Ig strand C 1420..1424 CDD:409564 1/3 (33%)
Ig strand E 1445..1449 CDD:409564 0/3 (0%)
Ig strand F 1459..1464 CDD:409564 1/4 (25%)
Ig strand G 1472..1475 CDD:409564 0/2 (0%)
I-set 1491..1580 CDD:400151 27/90 (30%)
Ig strand B 1508..1512 CDD:409353 0/3 (0%)
Ig strand C 1521..1525 CDD:409353 0/3 (0%)
Ig strand E 1546..1550 CDD:409353 1/3 (33%)
Ig strand F 1560..1565 CDD:409353 2/4 (50%)
Ig strand G 1573..1576 CDD:409353 1/2 (50%)
I-set 1589..1675 CDD:400151 3/4 (75%)
Ig strand B 1606..1610 CDD:409353
Ig strand C 1619..1623 CDD:409353
Ig strand E 1641..1645 CDD:409353
Ig strand F 1655..1660 CDD:409353
Ig strand G 1668..1671 CDD:409353
I-set 1702..1786 CDD:400151
Ig strand B 1714..1718 CDD:409353
Ig strand C 1727..1731 CDD:409353
Ig strand E 1752..1756 CDD:409353
Ig strand F 1766..1771 CDD:409353
Ig strand G 1779..1782 CDD:409353
I-set 1811..1902 CDD:400151
Ig strand B 1828..1832 CDD:409353
Ig strand C 1841..1845 CDD:409353
Ig strand E 1868..1872 CDD:409353
Ig strand F 1882..1887 CDD:409353
I-set 1927..2015 CDD:400151
Ig strand B 1944..1948 CDD:409353
Ig strand C 1957..1961 CDD:409353
Ig strand E 1981..1985 CDD:409353
Ig strand F 1995..2000 CDD:409353
Ig strand G 2008..2011 CDD:409353
Ig 2142..2231 CDD:472250
Ig strand B 2159..2163 CDD:409353
Ig strand C 2172..2176 CDD:409353
Ig strand E 2197..2201 CDD:409353
Ig strand F 2211..2216 CDD:409353
Ig strand G 2224..2227 CDD:409353
I-set 2238..2325 CDD:400151
Ig strand B 2255..2259 CDD:409353
Ig strand C 2268..2272 CDD:409353
Ig strand F 2309..2314 CDD:409353
PHA03247 <2593..2893 CDD:223021
I-set 3566..3655 CDD:400151
Ig strand B 3583..3587 CDD:409353
Ig strand C 3596..3600 CDD:409353
Ig strand E 3621..3625 CDD:409353
Ig strand F 3635..3640 CDD:409353
Ig strand G 3648..3651 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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