DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment INTS11 and YSH1

DIOPT Version :10

Sequence 1:XP_011539949.1 Gene:INTS11 / 54973 HGNCID:26052 Length:660 Species:Homo sapiens
Sequence 2:NP_013379.1 Gene:YSH1 / 850983 SGDID:S000004267 Length:779 Species:Saccharomyces cerevisiae


Alignment Length:678 Identity:203/678 - (29%)
Similarity:321/678 - (47%) Gaps:139/678 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    63 FEWLAGGGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFP-----DFSYITQNGRLTDFLD 122
            |::.:.||: .:|||||.::...||.||||.|:|..:......|     |.|.:          |
Yeast     9 FKFFSLGGS-NEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFDLSKV----------D 62

Human   123 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKI--------AVDKKGEAN 179
            .::||||||||..:|||..:...:.|.::|||||:||...||.|:.::        ::..|.| .
Yeast    63 ILLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKDE-G 126

Human   180 FFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPD 244
            .|:.:.:.|...|:..|..|.||.|:. ::..|::||||||||||||::....|::||||:...|
Yeast   127 LFSDEDLVDSFDKIETVDYHSTVDVNG-IKFTAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREVD 190

Human   245 RHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELC 309
            |||.:|.:.....|:||.|||:.|...:.:..|||...:.:|.||.|||:||:||||||||||:.
Yeast   191 RHLNSAEVPPLSSNVLIVESTFGTATHEPRLNRERKLTQLIHSTVMRGGRVLLPVFALGRAQEIM 255

Human   310 ILLETFW-----ERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTF--VQRNMFEFKHIKA 367
            ::|:.:|     |....:|||::::.|.:|....::.::...|..|||.|  .|.|.|.||:| :
Yeast   256 LILDEYWSQHADELGGGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFRDSQTNPFIFKNI-S 319

Human   368 FDRAFAD--NPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKL 430
            :.|...|  :.||.|:.|:||||.:|.|..:..:|...:||:|::.||.::||:...|:.....:
Yeast   320 YLRNLEDFQDFGPSVMLASPGMLQSGLSRDLLERWCPEDKNLVLITGYSIEGTMAKFIMLEPDTI 384

Human   431 EMEGRQVLEV--KMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQEL-- 491
            .......:.:  :.|||.:||:||.|.:..::.:.:....:::||||||..|..||..:....  
Yeast   385 PSINNPEITIPRRCQVEEISFAAHVDFQENLEFIEKISAPNIILVHGEANPMGRLKSALLSNFAS 449

Human   492 ------RVNCYMPANGETVTLPTSPSIPVGISLG------------LLKREMA------------ 526
                  .|:.:.|.|...|.|... .:.|..::|            .:|.|:|            
Yeast   450 LKGTDNEVHVFNPRNCVEVDLEFQ-GVKVAKAVGNIVNEIYKEENVEIKEEIAAKIEPIKEENED 513

Human   527 -------QGLLPEAK-KPRLLHGTLIMKDSNFRLVSSEQALKELGLAEH-------------QLR 570
                   :||:.|.: |..::.|.|:..|.||.|    ..|....|.||             .:|
Yeast   514 NLDSQAEKGLVDEEEHKDIVVSGILVSDDKNFEL----DFLSLSDLREHHPDLSTTILRERQSVR 574

Human   571 FTCRVHLHDTRKEQETALRVYSHL------KSVLKDHCVQHLPDGSVTVESVLLQAAAPSEDPGT 629
            ..|:..|            :|.|:      ..||:|       |..||.:...::..:......|
Yeast   575 VNCKKEL------------IYWHILQMFGEAEVLQD-------DDRVTNQEPKVKEESKDNLTNT 620

Human   630 -KVLL----------------VSWTYQD 640
             |::|                |.|| ||
Yeast   621 GKLILQIMGDIKLTIVNTLAVVEWT-QD 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
INTS11XP_011539949.1 COG1782 69..506 CDD:441388 163/468 (35%)
INTS11-like_MBL-fold 70..264 CDD:293849 76/206 (37%)
YSH1NP_013379.1 CPSF3-like_MBL-fold 9..210 CDD:293850 78/213 (37%)
YSH1 14..432 CDD:440849 153/431 (35%)
CPSF73-100_C 533..777 CDD:463330 29/139 (21%)

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