DRSC/TRiP Functional Genomics Resources

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Protein Alignment INTS11 and Cpsf73

DIOPT Version :10

Sequence 1:XP_011539949.1 Gene:INTS11 / 54973 HGNCID:26052 Length:660 Species:Homo sapiens
Sequence 2:NP_650738.1 Gene:Cpsf73 / 42240 FlyBaseID:FBgn0261065 Length:684 Species:Drosophila melanogaster


Alignment Length:629 Identity:215/629 - (34%)
Similarity:318/629 - (50%) Gaps:105/629 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    70 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHC 134
            ||||:||||||::...||.:|||||:|.|.:.....|....|.     .|.:|.:.|||||||||
  Fly    24 GAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLIE-----ADEIDLLFISHFHLDHC 83

Human   135 GALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQM------IKDCMKKV 193
            ||||:|.....:.|..:|||.|:||...:|.||.||       :|..|.||      ::..|:|:
  Fly    84 GALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKI-------SNISTEQMLYTEADLEASMEKI 141

Human   194 VAVHLHQTVQVDDELEIK--AYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCR 256
            ..::.|:.   .|.:.::  ||.||||||||||.|::....::||||::...||||.||.:...:
  Fly   142 ETINFHEE---RDVMGVRFCAYIAGHVLGAAMFMIEIAGIKILYTGDFSRQEDRHLMAAEVPPMK 203

Human   257 PNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFW-ERMN 320
            |::|||||||.|.|.:.:..||..|...|.:.|::||:.|||||||||||||.::|:.|| :..:
  Fly   204 PDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLILDEFWSQNPD 268

Human   321 L-KVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHI---KAFDRAFADNPGPMVV 381
            | ::|||:::.|.:|....|:.:|...|.:||:.....|.|.|:||   |..|. |.| .||.|:
  Fly   269 LHEIPIYYASSLAKKCMAVYQTYINAMNDRIRRQIAVNNPFVFRHISNLKGIDH-FED-IGPCVI 331

Human   382 FATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEY 446
            .|:|||:.:|.|.::|..|..:.||.||:.||||:||:...:||...::.....|.|.:.|.|:|
  Fly   332 MASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITTLSGQKLPLNMSVDY 396

Human   447 MSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELR------VNCYMPANGETVT 505
            :|||||.|.:...:.:...:|..|:|||||..:|..||..:::|..      :..|.|.|...|.
  Fly   397 ISFSAHTDYQQTSEFIRLLKPTHVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVD 461

Human   506 L-------------PTSPSIPVGISLG--LLKREMAQGLLPEAKKPRLLHGTLIMKDSNFRLVSS 555
            |             ..:.:..||..|.  |:||:....||..:...:       ..|.:..:|:.
  Fly   462 LYFRGEKTAKVMGSLAAKNSEVGSKLSGVLVKRDFKYHLLAPSDLGK-------YTDMSMSVVTQ 519

Human   556 EQ------ALKELGLAEHQLRFTCRVHLHDTRKEQETALRVYSHLKSVLKDHCVQHLPDGSVTVE 614
            .|      :|..|.|...::...|...|     |.|..|||:.         |::      :|||
  Fly   520 RQSIPWGSSLSTLELLLDRIGAGCVEVL-----EAERKLRVFG---------CIE------LTVE 564

Human   615 SVLLQAAAPSEDPGTKVLLVSW-------TYQDEELGSFLTSLL 651
            .              |::::.|       .|.|..|...:.|.|
  Fly   565 Q--------------KIIVMEWQATHVNDVYADAVLACIMQSEL 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
INTS11XP_011539949.1 COG1782 69..506 CDD:441388 182/454 (40%)
INTS11-like_MBL-fold 70..264 CDD:293849 84/201 (42%)
Cpsf73NP_650738.1 CPSF3-like_MBL-fold 18..211 CDD:293850 84/201 (42%)
YSH1 19..427 CDD:440849 173/419 (41%)
CPSF73-100_C 486..680 CDD:463330 30/150 (20%)

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