DRSC/TRiP Functional Genomics Resources

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Protein Alignment INTS11 and Snm1

DIOPT Version :10

Sequence 1:XP_011539949.1 Gene:INTS11 / 54973 HGNCID:26052 Length:660 Species:Homo sapiens
Sequence 2:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster


Alignment Length:699 Identity:119/699 - (17%)
Similarity:214/699 - (30%) Gaps:295/699 - (42%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPEIRVTPLGACPVLSWNLV-LPPGRGSRAPSSTDTRTGFHVLP-----HGPLG----------- 48
            |||.:::.      .|.:|| :.||     |:.:.|...:...|     ..|||           
  Fly   205 MPEAKLSN------SSLDLVEISPG-----PNKSPTNNFYRSSPAAITKESPLGKNSKKGTVRKQ 258

Human    49 -----CGPVILMCGAGFGHFEWLAGGGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDF 108
                 |.|..::.|..|                  |:                    |..:|.:.
  Fly   259 RKPKPCPPYKVVEGTSF------------------CV--------------------DGFQFGEI 285

Human   109 SYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVD 173
            ..:|.          ..::|||.||     |......:..|:|       :.||           
  Fly   286 EGVTH----------YFLTHFHADH-----YIGLTKKFCHPLY-------VSPI----------- 317

Human   174 KKGEANFFTSQMIKDCMKKVVAVHLH-----QTVQVDDELEIKAYYAGHVLGAAMFQIKVGS-ES 232
                    ::::::..: |:...|:|     ||:.||. :::.|..|.|..||.||..|:.| |.
  Fly   318 --------SARLVRTFI-KLDETHIHEIDVDQTLDVDG-VQVTALEANHCPGALMFFFKLSSGEC 372

Human   233 VVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLI 297
            :::|||:..:.|......:.:....:||..::||..        :..||..: .|:|:|...::.
  Fly   373 ILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMN--------KNYDFCHQ-SESVDRAVDLVR 428

Human   298 PVFALGRAQELCILL-------ETFW----ERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIR 351
            .......|:.:.|:.       |..|    :...::|                     ||... |
  Fly   429 AFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMRV---------------------WTESN-R 471

Human   352 KTFVQ-RNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKW------------AGN 403
            .|.|: .|..:...:...||:.|:    :.|.|. |.:.....:..|.::            :|.
  Fly   472 STAVRCLNWPDLDSVLTEDRSGAN----LHVIAM-GKISYPSLVDYFTEFEDQYDMLLGIRPSGW 531

Human   404 EKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPE 468
            |||.  .|.|                    |:::..:.::     :|.|:..|.:.:.|...:|:
  Fly   532 EKNS--KPSY--------------------GKRISTIGIE-----YSEHSSYKELERFVRFLKPK 569

Human   469 SV---------LLVHGE----------------------------AKKMEFLKQKIEQELRVN-- 494
            .|         |.|.||                            ..|..|.|...:.|:.::  
  Fly   570 RVISTVPVGRDLYVTGEVPIRWYKYEGRASMLRTGFQPSISTFLATPKRAFAKFSADTEMFLSPV 634

Human   495 ----------------------------------CY-----MPANGETVTLPTSPSIPVGISLGL 520
                                              |:     :|...|.:...|||:..:...|..
  Fly   635 DENASKGSEDKKDDDRESVVPTNHVTIISDTPEECFQTDSKIPVKNEPLAPDTSPNSEIVAQLNA 699

Human   521 LKREMA--------QGLLPEAKK-PRL-LHGTLIMKDSNFRLVSSEQAL 559
            ::.|:.        :.:.|:|.. ||: ...|....|.|...|...||:
  Fly   700 MESEIPYVEIDIKNETIAPDAVLIPRVPTEDTFQSTDCNVIGVQKSQAV 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
INTS11XP_011539949.1 COG1782 69..506 CDD:441388 86/544 (16%)
INTS11-like_MBL-fold 70..264 CDD:293849 37/199 (19%)
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 43/236 (18%)
DRMBL 481..578 CDD:429512 20/128 (16%)

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