DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOHLH2 and mxl-3

DIOPT Version :9

Sequence 1:NP_060296.2 Gene:SOHLH2 / 54937 HGNCID:26026 Length:425 Species:Homo sapiens
Sequence 2:NP_510223.1 Gene:mxl-3 / 181457 WormBaseID:WBGene00003511 Length:235 Species:Caenorhabditis elegans


Alignment Length:173 Identity:36/173 - (20%)
Similarity:70/173 - (40%) Gaps:40/173 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   206 HSSKEKLRRERIKYCCEQLRTLLPYVKGRKNDAASVLEATVDYVKYIREKIS---PAV--MAQIT 265
            |:..|:.||:.||.....|:..:|.:.|.|:..|.:|:..|:::..::.|:|   .|:  :.:..
 Worm    52 HNELERRRRDHIKDHFTILKDAIPLLDGEKSSRALILKRAVEFIHVMQTKLSSQGKAIEDLTRKN 116

Human   266 EALQSNMRFCKKQQTPIELSLPGTVMA------------------------QRENSVMSTYSPER 306
            |.|:..:...:...:|....||...::                        |:.|.:..:.:|.:
 Worm   117 ELLEERLLERESSGSPSSSRLPALAVSSSQMQLTMPIIPQMQNIAQLSQYPQQANIIAQSTNPAQ 181

Human   307 --GLQFLTNTCWNGCSTPDAESSLDEAVRVPSSSASENAIGDP 347
              ||..|.|         ||..:|..:.:..|.|..::|.|.|
 Worm   182 LDGLIALNN---------DAILALLGSFQSVSPSLLDSAPGTP 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOHLH2NP_060296.2 HLH 197..257 CDD:238036 14/50 (28%)
mxl-3NP_510223.1 bHLHzip_Max 48..116 CDD:381412 16/63 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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