DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRMT10C and trmt-10C.1

DIOPT Version :10

Sequence 1:NP_060289.2 Gene:TRMT10C / 54931 HGNCID:26022 Length:403 Species:Homo sapiens
Sequence 2:NP_491647.3 Gene:trmt-10C.1 / 259376 WormBaseID:WBGene00018513 Length:390 Species:Caenorhabditis elegans


Alignment Length:400 Identity:93/400 - (23%)
Similarity:170/400 - (42%) Gaps:78/400 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    58 SEELELDKWKTTMKSSVQEECVS-------TISSSKDEDPLAATREFIE---------------M 100
            |.:.:|.:|......::.::.||       .|:||  .:|.:..||.:.               :
 Worm     5 SNKFQLLQWNFRRLLNIPQKTVSPVVWRPPMITSS--HEPSSEFRENLSEEENKRIDRILEELFL 67

Human   101 WRLLGREVPEHITEEELKTLMECVSNTAKKKYLKYLYTKEKVKKARQIKKEMKAAARE-EAKNI- 163
            :..|....|:.|::.|.||.:|..|..::.....:|:.|||:::....||..|...|: ..:|: 
 Worm    68 FSRLSVRFPKKISDSEWKTFLELKSRKSRFDEAMFLFRKEKLEEEDARKKLEKVNFRKISEQNVG 132

Human   164 -----KLLETTEEDKQKNFLFLRLWDRNMDIAMGWKGAQAMQFGQPLVFDMAYENYMKRKELQNT 223
                 .:|.......::.:...||::           |..::....|..|..:.:.:..:....|
 Worm   133 SRVPSYMLHFPNSVSEEYYQMKRLYE-----------AYLLENRPILAVDCQFLSRLSPRGRGLT 186

Human   224 VSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRELVKRYQEKWDKLLLTSTEKSHV--------- 279
            ..||......||||.|||.::|.|.....:..::|        :|..|.|..||||         
 Worm   187 ALQLQYLITENRRNPDPFRLHFVNYDSKNSSIQDL--------EKSKLQSIRKSHVFNPIVTENG 243

Human   280 -DLFPKDS--IIYLTADSPNVMTTFRHDKVYVIGSFVDKSMQPG----TSLAKAKRLNLATECLP 337
             :.:...|  :|||:.|:...:.:...||:||||..||:..:||    .||..::...:....||
 Worm   244 LETYENHSKNVIYLSPDATEELESVDDDKIYVIGGIVDRVPEPGIPKHASLEASQSAGVFARKLP 308

Human   338 LDKYLQWEIGNKNLTLDQMIRILLCLKNNGNWQEALQF-VPKRKHTGF-----------LEISQH 390
            :|:|:.::.|:|.|||..:..||..:..:|:|::|::. :|.|...|.           |.|...
 Worm   309 IDRYVDFKSGSKFLTLLAVAEILRQVNIHGDWKKAMKVAIPVRNTRGADEKNPKARAAQLRIHAF 373

Human   391 SQEFINRLKK 400
            :||.:.|:.:
 Worm   374 NQEILKRIDR 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRMT10CNP_060289.2 Trm10_MRRP1 203..380 CDD:349975 54/193 (28%)
trmt-10C.1NP_491647.3 Trm10_MRRP1 166..351 CDD:349975 54/192 (28%)

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