DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RASIP1 and myo52

DIOPT Version :9

Sequence 1:NP_060275.2 Gene:RASIP1 / 54922 HGNCID:24716 Length:963 Species:Homo sapiens
Sequence 2:NP_588492.1 Gene:myo52 / 2538846 PomBaseID:SPCC1919.10c Length:1516 Species:Schizosaccharomyces pombe


Alignment Length:278 Identity:56/278 - (20%)
Similarity:98/278 - (35%) Gaps:68/278 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   577 TLLALCVQHSARELE-LGHLPRLLGRLARLIKEAVW-----EKIKEIGDRQPENHPEGVPEVPLT 635
            ||..|.::.:..|.: |.||  .|.:|..:|...:|     ::...:.:|...:..|.|.:    
pombe  1117 TLKTLLLKDNDVEAQKLDHL--FLAKLLFIIISQMWKSNLCQESVALVERYCVHTLEYVFQ---- 1175

Human   636 PEAVSVELRP-LMLWMANTTELLSFVQEKVLEMEKEADQEDPQLCNDLELCDEAMALLD----EV 695
             :..|...|| :..|:|||..||:||..|....:..:                |..||.    |.
pombe  1176 -KTSSANERPDIGFWVANTHALLAFVYTKQQAFKHSS----------------AFTLLSTESHES 1223

Human   696 IMCTFQQSVYYLTKTLYSTL--------PALLDSNPFTAGAELPGPGAELGAMPPGLR------- 745
            :...|:....:|:|..:..:        |.::.:...|      |...:.|.....||       
pombe  1224 VQTIFEMIESHLSKIFFEWVRQVNNFLKPLIVQAMIIT------GTNTDAGDENRKLRIKFFEKP 1282

Human   746 --PTLGVFQAALELTSQCELHP---DLVSQTFGYLFFFSNASLLNSLM--ERGQGRPFYQWSRAV 803
              ....|.....::...|:.:.   ::.:.....::.|.|....|||.  |||      .|.|..
pombe  1283 KYKITDVIHVLNKVHDSCQAYKVNYEIYNALIRSIYRFINVEAFNSLFIDERG------SWKRGT 1341

Human   804 QIRTNLDLVLDWLQGAGL 821
            .|..|..::.||...:|:
pombe  1342 NISYNYHVLKDWCLESGV 1359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RASIP1NP_060275.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..118
RA 144..258 CDD:279168
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..356
Myo5p-like_CBD_Rasip1 551..913 CDD:271256 56/278 (20%)
myo52NP_588492.1 COG5022 1..1501 CDD:227355 56/278 (20%)
MYSc_Myo5 87..754 CDD:276831
Myo5p-like_CBD_fungal 1105..1434 CDD:271258 56/278 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.