DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TTC19 and ttc19

DIOPT Version :10

Sequence 1:NP_060245.3 Gene:TTC19 / 54902 HGNCID:26006 Length:380 Species:Homo sapiens
Sequence 2:NP_001333173.1 Gene:ttc19 / 564788 ZFINID:ZDB-GENE-070912-490 Length:403 Species:Danio rerio


Alignment Length:319 Identity:152/319 - (47%)
Similarity:213/319 - (66%) Gaps:15/319 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    63 LAW----FSRPAAAEEEEQQGADGAAAEDGADEAEAEIIQLLKRAKLSIMKDEPEEAELILHDAL 123
            |||    ||....::|:.::           .:.|.|:|.|||:||.|:|..|.:.|:..||.|:
Zfish    88 LAWGAVAFSLFGGSDEKTEE-----------QKLEDELILLLKKAKYSMMIGELDAADGFLHRAV 141

Human   124 RLAYQTDNKKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASI 188
            |||:|..|..||.|||.|||||||:||||:|||:||||.||::|.||..|:|||:||:|||||||
Zfish   142 RLAHQMHNNDAIIYTYSLMANLAFVRGQLDNAEKLFKAAMSFMLSGGTPQDDNALIEMSLKLASI 206

Human   189 YAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQP 253
            ||.||:.|.|..|::||..:||.|::::|:|..:.:|.||:.:|.||||:.|||.||||..:.:.
Zfish   207 YATQNKNELAEHGFQFCTDSLEAKMDKQKDLPPESLSDEERKDTRLLLGLSLDARARYLAANHRF 271

Human   254 SQAQRMYEKALQISEEIQGERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELH 318
            ..|.|.|..||||.:|.|||.||||:||||||||.||.||:.|||.:|:::|.:|.:...|||.|
Zfish   272 IGACRDYRHALQICQEEQGESHPQTLVLMSDLATVLDLQGKHDEALVYVKKAVELGQAAGHPEQH 336

Human   319 MVLSNLAAVLMHRERYTQAKEIYQEALKQAKLKKDEISVQHIREELAELSKKSRPLTNS 377
            ::|.|:|.:|||...:.::.::|||||..|....|..:::.::|.|.||..:.....||
Zfish   337 VLLGNMAGILMHNGEFEESAKLYQEALALAHTAGDAEAIEQLQEGLKELDNRRNAKDNS 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TTC19NP_060245.3 LapB 102..348 CDD:442196 132/245 (54%)
TPR 1 136..169 24/32 (75%)
TPR 2 179..212 20/32 (63%)
Spy 227..>348 CDD:443119 62/120 (52%)
TPR 3 237..270 15/32 (47%)
TPR repeat 278..308 CDD:276809 18/29 (62%)
TPR 4 279..312 18/32 (56%)
TPR 5 318..351 13/32 (41%)
TPR repeat 318..346 CDD:276809 11/27 (41%)
ttc19NP_001333173.1 Spy 129..>394 CDD:443119 134/264 (51%)
TPR 1 154..187 24/32 (75%)
TPR repeat 296..326 CDD:276809 18/29 (62%)
TPR 2 297..330 18/32 (56%)
TPR 3 336..369 13/32 (41%)
TPR repeat 336..364 CDD:276809 11/27 (41%)

Return to query results.
Submit another query.