DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NSUN2 and trm401

DIOPT Version :10

Sequence 1:NP_060225.4 Gene:NSUN2 / 54888 HGNCID:25994 Length:767 Species:Homo sapiens
Sequence 2:NP_594695.3 Gene:trm401 / 2542264 PomBaseID:SPAC17D4.04 Length:688 Species:Schizosaccharomyces pombe


Alignment Length:732 Identity:266/732 - (36%)
Similarity:395/732 - (53%) Gaps:118/732 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    28 KRGE-AGWEGGYPEIVKENKLFEHYYQELKIVPEGEWGQFMDALREPLPATLRITGYKSHAKEIL 91
            |:|| ..|:    .|.::|:.||.||:..|:|.|.::......|.|.||.|.|||....||.::.
pombe    14 KKGEFVNWD----LIERKNENFEKYYRLQKLVTEDDFILLKQKLTEQLPTTFRITASIPHATQVR 74

Human    92 HCLKNKYFKELEDLEVDGQKVEVPQPLSWYPEELAWHTNLSRKILRKSPHLEKFHQFLVSETESG 156
            ......|:..:|:...:..|:.:|..|.|||:.:|:..::|::::||||||:...:|||.|||:|
pombe    75 DYFIEHYYPLIENARTEDAKIPLPVSLPWYPDGMAFMLDISKEVIRKSPHLKALQEFLVLETEAG 139

Human   157 NISRQEAVSMIPPLLLNVRPHHKILDMCAAPGSKTTQLIEMLH-----ADMNVPFPEGFVIANDV 216
            :|:|||:|||:|||||||..|||:|||||||||||.||:|.||     .|:....|.|.|||||.
pombe   140 DINRQESVSMVPPLLLNVESHHKVLDMCAAPGSKTAQLLEALHKPTKKEDITTLLPSGIVIANDS 204

Human   217 DNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQIDVDGRKEILFYDRILCDVPCSGDGTMRKNI 281
            ||||.::||||.|||:||.:::||||||.:|...:.....|:.|.:||||.|||||||||.||||
pombe   205 DNKRAHMLVHQIKRLNSPNVLIVNHDASFLPNFHLSSPDGKKFLKFDRILADVPCSGDGTFRKNI 269

Human   282 DVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPIEDEAVIASLLEKSEGALELA 346
            .:|.:|:...:|.||..|::|..||.:.|.:|||:|||||||||||:|||::::|..:.|::.|.
pombe   270 ALWNEWSLKTALGLHATQIKILMRGLQLLEKGGRLVYSTCSLNPIENEAVVSAVLNATRGSVRLV 334

Human   347 DVSNELPGLKWMPGITQWKVMTKDGQWFTDWDAVPHSRHTQIRPTMFP-PKDPEKLQAMHLERCL 410
            |||:|||.||...|:..|.|...|...:..:|.:|...:.::.||::| ||  ::|..::::.||
pombe   335 DVSSELPQLKRSQGVDNWVVCDSDLNIYPSFDTLPKELYEKMPPTLWPLPK--KELAELNIQNCL 397

Human   411 RILPHHQNTGGFFVAVLVK--------KSSMPWNK---RQPKLQGKSA--ETRESTQLSPAD--L 460
            ||.||.|||||||||||.|        |:::..||   |:.||..:.|  :.::.||.:.:|  |
pombe   398 RIYPHFQNTGGFFVAVLEKYENLTSSMKTAVDDNKVFLREQKLPSEQASKKRKQDTQETSSDSKL 462

Human   461 TEGKPTDPSKLESPSFTGTGDTEIAHATEDLENNGSKKDGVCGPPPSKKMKLFGFKE-DPFVFIP 524
            .|.||..                        :|.|::                 |.| ||||:|.
pombe   463 AEVKPKG------------------------KNGGNR-----------------FHELDPFVYIK 486

Human   525 EDDPLFPPIEKFYALDPSFPRMN-LLTRTTEGKKRQLYMVSKEL-RNVLLNNSEKMKVINTGIKV 587
            |||.....|.|.:.:|.:..:.| ...|...|...:...:|.:| |||:.||..::|.::.|:|:
pombe   487 EDDQALEKIYKKFGIDEAIIKKNQFFVRNVNGVPTKAIYISNDLFRNVIENNRNRVKFVHGGLKI 551

Human   588 WCRNNSG--------EEFDCAFRLAQEGIYTLYPFI-NSRIITVSMEDVKILLTQ---------E 634
            :.|.:.|        :...|.||:..:|......|| .|.:...::.|:.|||..         |
pombe   552 FVRQDFGSLSREIAEKNGTCVFRVQSDGANLASHFIAESCLFHTTLSDLFILLDHEAVTIDDFPE 616

Human   635 NPFFRKLSSETYSQAK--------DLAKGSIVLKYEPDSANPDALQCPIVLCGWRGKASIRTFVP 691
            :..|||    .|:...        ||||...|:|.:        :..|:    |:........:.
pombe   617 DSLFRK----EYNHLDLGSTLLHVDLAKEESVIKKQ--------VYIPL----WKSVRICNVLLS 665

Human   692 KNERLHYLRMMGLEVLG 708
            .:|:    |.:.|::.|
pombe   666 NSEK----RTLKLQIEG 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSUN2NP_060225.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 4/8 (50%)
RsmB <59..431 CDD:439914 182/385 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 436..481 13/51 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 719..767
trm401NP_594695.3 RsmB <88..416 CDD:439914 168/329 (51%)
Blue background indicates that the domain is not in the aligned region.

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