DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment rlim and YBR062C

DIOPT Version :9

Sequence 1:	NP_001016091.1	Gene:	rlim / 548845	XenbaseID:	XB-GENE-492020	Length:	639	Species:	Xenopus tropicalis
Sequence 2:	NP_009618.2	Gene:	YBR062C / 852354	SGDID:	S000000266	Length:	180	Species:	Saccharomyces cerevisiae

Alignment Length:	146	Identity:	41/146 - (28%)
Similarity:	61/146 - (41%)	Gaps:	25/146 - (17%)

- Green bases have known domain annotations that are detailed below.

Frog   512 EEGSNVSTSSARREGRNSRGGVTFEESG-----------SLPFLSLAQFFL--------LNEDDD 557
            :|....|....||:.|:...|: |:..|           |...|.|....|        |.|.|.
Yeast    18 QEVGGTSQEEQRRQVRSQLQGL-FQNFGNTSGEGDAHSDSTLLLRLLSQMLPESLQEEWLQEMDK 81

Frog   558 DQPRGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGN--KLRKLP-CSHEYHVHCIDRWLSEN 619
            .:..|.......:|...|..:..|...||:|.|.|.|..  .:.:|| |.|::.:.|:..|||.:
Yeast    82 GKSAGCPDTFAASLPRINKKKLKATDNCSICYTNYLEDEYPLVVELPHCHHKFDLECLSVWLSRS 146

Frog   620 STCPICRRAVLVAGNR 635
            :|||:||..|:  |:|
Yeast   147 TTCPLCRDNVM--GHR 160

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rlim	NP_001016091.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..28
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	67..403
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	467..534		6/21 (29%)
		zf-RING_2	584..626	CDD:290367	17/44 (39%)
		PDZ-binding. /evidence=ECO:0000255	636..639		41/146 (28%)
YBR062C	NP_009618.2	RING_Ubox	109..153	CDD:418438	17/43 (40%)
YBR062C	NP_009618.2	RING-H2 finger (C3H2C3-type)	109..152	CDD:319361	17/42 (40%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2338
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.940