| Sequence 1: | NP_001016091.1 | Gene: | rlim / 548845 | XenbaseID: | XB-GENE-492020 | Length: | 639 | Species: | Xenopus tropicalis |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_009306042.1 | Gene: | rlim / 562487 | ZFINID: | ZDB-GENE-120809-2 | Length: | 638 | Species: | Danio rerio |
| Alignment Length: | 697 | Identity: | 365/697 - (52%) |
|---|---|---|---|
| Similarity: | 433/697 - (62%) | Gaps: | 117/697 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Frog 1 MESADSAGKGSTEQSESQRQSQMDRLDREEAFYQFVNNLNEDDYRLMRDNNLLGTPGEITKEELL 65
Frog 66 RRLQQIKEGPPQPS---TEGTRGDPVSASGDPAEDSSNGDSIIDWLNSVRQTGNTTRSGQRGNQS 127
Frog 128 WRAVSRTNPNSGDFRFSLEINVNRTSGNPSMPS--LEQSSEMPGAEDMEVSSQGENEN------- 183
Frog 184 -------EPEPVAPRVAQAEVTEEAPV-------------------QRGQRRARSRSPDQRRTRA 222
Frog 223 RTDRSRSPLHQAVEPPIRRAQHSSSQTVDASSTEEAEGSSRTRHHVSSQMQNSSSSNETEGSSRT 287
Frog 288 RQHITARQQALGTEGQSQSQTQTQSQSQTQTQSQTQSQSTVHLSNPESRSSSQPPQTDSSSNAET 352
Frog 353 TGTGQRPPTIVLDLQVRRVRPGDYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAG 417
Frog 418 VRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFM---YNDNDTDPNNPTPVSP 479
Frog 480 PAAVPGEAQNLVSPEPPAPIVEPPEPVAPVESEEGSNVSTSSARREGRNSRGG------------ 532
Frog 533 -----VTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALKTCSVCITEY 592
Frog 593 TEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVAGNRESIV 639 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rlim | NP_001016091.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..28 | 15/26 (58%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 67..403 | 155/373 (42%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 467..534 | 15/83 (18%) | |||
| zf-RING_2 | 584..626 | CDD:290367 | 40/41 (98%) | ||
| PDZ-binding. /evidence=ECO:0000255 | 636..639 | 2/2 (100%) | |||
| rlim | XP_009306042.1 | zf-RING_2 | 583..625 | CDD:290367 | 40/41 (98%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 521 | 1.000 | Domainoid score | I2503 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H7920 | |
| Inparanoid | 1 | 1.050 | 635 | 1.000 | Inparanoid score | I4914 |
| OMA | 1 | 1.010 | - | - | QHG40698 | |
| OrthoDB | 1 | 1.010 | - | - | D1487241at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0008409 | |
| OrthoInspector | 1 | 1.000 | - | - | otm37392 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR45931 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2338 |
| SonicParanoid | 1 | 1.000 | - | - | X7542 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 12 | 12.110 | |||||