Protein Alignment rlim and meu34

DIOPT Version :9

• Sequence 1: NP_001016091.1
• Gene: rlim / 548845
• XenbaseID: XB-GENE-492020
• Length: 639
• Species: Xenopus tropicalis
• Sequence 2: NP_593329.1
• Gene: meu34 / 2543036
• PomBaseID: SPAC3A12.03c
• Length: 309
• Species: Schizosaccharomyces pombe
• Alignment Length: 119
• Identity: 31/119 - (26%)
• Similarity: 51/119 - (42%)
• Gaps: 24/119 - (20%)

 Frog   510 ESEEGSNVSTSSARREGRNSRGGVTFEESGSLPFLSLAQFFLLNEDDDDQPRG--LTKEQIDNLS 572
            :.|..|.:.|...||.   :.|..:|.|..|    :|:..:..:..|.|....  |.:::.|
pombe   149 QGETPSVIITYDVRRP---NLGSTSFVEMSS----ALSNIYNTDASDGDSSDDSCLLEDEED--- 203

 Frog   573 TRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSE-NSTCPIC 625
                       .|.:|..:|...:.||.|||.|.:|..|||.|::. .::||:|
pombe   204 -----------FCIICYADYAFDDILRVLPCEHVFHTQCIDTWMTTMKASCPLC 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rlim	NP_001016091.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..28
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	67..403
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	467..534		6/23 (26%)
		zf-RING_2	584..626	CDD:290367	17/43 (40%)
		PDZ-binding. /evidence=ECO:0000255	636..639
meu34	NP_593329.1	RING	205..249	CDD:238093	17/42 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	58	1.000	Domainoid score	I3410
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000