DRSC/TRiP Functional Genomics Resources

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Protein Alignment rlim and SPAC57A7.09

DIOPT Version :9

Sequence 1:NP_001016091.1 Gene:rlim / 548845 XenbaseID:XB-GENE-492020 Length:639 Species:Xenopus tropicalis
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rlimNP_001016091.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..403
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 467..534
zf-RING_2 584..626 CDD:290367
PDZ-binding. /evidence=ECO:0000255 636..639
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827
Peptidases_S8_S53 <144..211 CDD:299169
zf-RING_2 320..362 CDD:290367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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