Protein Alignment rlim and SPBC2A9.04c

DIOPT Version :9

• Sequence 1: NP_001016091.1
• Gene: rlim / 548845
• XenbaseID: XB-GENE-492020
• Length: 639
• Species: Xenopus tropicalis
• Sequence 2: NP_596213.1
• Gene: SPBC2A9.04c / 2540480
• PomBaseID: SPBC2A9.04c
• Length: 741
• Species: Schizosaccharomyces pombe
• Alignment Length: 695
• Identity: 128/695 - (18%)
• Similarity: 205/695 - (29%)
• Gaps: 265/695 - (38%)

 Frog    43 DYRLMRDNNLLGTPGEITKEELLRRLQQI---------------------KEGPPQP----STEG 82
            |:....:.|...|.|....:|..|:|.:|                     ...|..|    ||..
pombe   196 DFHPSEELNNANTDGRTGVDEPARQLHRIAFNRIRFILAPNRSATNTPVENTHPENPDSNTSTPT 260

 Frog    83 TRGDPVSASGDPAEDSSNGDSIIDWLNSVRQTGNTTRSGQRGN------QSWRAVSRTNPNSGDF 141
            ||.:|::..| .:.|:.|..|        ||  .||.|..|.:      .::.:.....|:|.:
pombe   261 TRSEPLAGEG-ASIDAENASS--------RQ--ETTPSDSRPSTLTSLFNAFFSSMPDRPSSNE- 313

 Frog   142 RFSLEINVNRTSGNPSMPSLEQSSEMPGAEDMEVSSQGENENEP-EPVAPR------------VA 193
                .:..|.||.:.||.: ..|:::|       :|...::|.| .||.|.            .|
pombe   314 ----PMTSNLTSNSGSMTN-STSTDLP-------TSNLPSQNAPARPVEPSPSIQPPNLLNLPTA 366

 Frog   194 QAEVTEEAPVQRGQRRARSRSPDQRRTRARTDRSRSPLHQ------------------------- 233
            ..|.|...|            ..|....|.|:||..|..|
pombe   367 SPESTSWLP------------GSQTNIPANTNRSERPFTQLMTFHGLPSLADLPAVLESMFRPSG 419

 Frog   234 --------AVEPPIRRAQHSSSQTVDASSTEEAEGSSRTRHHVSSQMQNSSSSNE---------- 280
                    .:..|...||..:.||:       .|.:..|..:.:|.:.|..:.|:
pombe   420 NNNLLNLNGIFHPDHNAQTENGQTL-------PENTDDTNSNATSAVPNLQNLNQQNAVTMGTNT 477

 Frog   281 -TEGSSRTRQ---HITARQQALGTEGQSQSQTQTQSQSQTQTQSQTQSQSTVHLSNPESRSSSQP 341
             ..|||....   ||...:..|           ..:.|:.:|.|:..|:.....::.....||:|
pombe   478 PNNGSSPAVHPVIHIYLSRPPL-----------QPAVSEQETPSEAVSREGTRSTDATMEDSSRP 531

 Frog   342 PQTDSSSNAETTGTGQRPPTIVLDLQVRRVRPGDYRQRDSIANRTRSRSQTPNNTVTYESERGGF 406
            |         :.|:.|.|....|....:|:......:.::..|:|||.|.||
pombe   532 P---------SNGSFQGPGITHLSEMGQRILQRFQEEMENRMNQTRSESSTP------------- 574

 Frog   407 RRTFSRSERAGVRTYVSTI-RIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYNDNDTD 470
                ::...||....|.|. |.|...|...|..|.:|..                        ..
pombe   575 ----AQQSAAGSSINVDTAGRQPSDEINIPGEYENSSEV------------------------AG 611

 Frog   471 PNNPTPVSPPAAVPGEAQNLVSPEPPAPIVEPPEPVAPVESEEGSNVSTSS---------ARREG 526
            ..|.||.....||  :..:.|:.:.||  :..|..|...::.:.|.||:.:         |||..
pombe   612 SRNQTPTHSSIAV--DTLSNVAVDQPA--ISTPSDVVGSDAGDTSKVSSGTSTPRMAAPIARRSN 672

 Frog   527 RNSRGGVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALKTCSVCITE 591
            |:.            |:         :.....:|:...::|                  .:|
pombe   673 RHH------------PY---------SRPSSTRPQCQLEDQ------------------GIC--- 695

 Frog   592 YTEGNKLRKLPCSHEYHVHC----------IDRWLSENSTCPICR 626
             ...::.....|.|..|..|          :|..:.|   ||.||
pombe   696 -DPNDRFVHFECGHSVHERCQQSTSNSENQMDEEIGE---CPKCR 736

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rlim	NP_001016091.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..28
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	67..403		81/426 (19%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	467..534		17/75 (23%)
		zf-RING_2	584..626	CDD:290367	9/51 (18%)
		PDZ-binding. /evidence=ECO:0000255	636..639
SPBC2A9.04c	NP_596213.1	zf-RING_2	106..150	CDD:290367
		TFIIA	348..>609	CDD:281188	60/316 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910