| Sequence 1: | NP_001016091.1 | Gene: | rlim / 548845 | XenbaseID: | XB-GENE-492020 | Length: | 639 | Species: | Xenopus tropicalis |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001345134.1 | Gene: | Rlim / 19820 | MGIID: | 1342291 | Length: | 600 | Species: | Mus musculus |
| Alignment Length: | 677 | Identity: | 423/677 - (62%) |
|---|---|---|---|
| Similarity: | 474/677 - (70%) | Gaps: | 115/677 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Frog 1 MESADSAGKGSTEQSESQRQSQMDRLDREEAFYQFVNNLNEDDYRLMRDNNLLGTPGEITKEELL 65
Frog 66 RRLQQIKEGPPQPSTEGTRGDPVSASGDPAEDSSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRA 130
Frog 131 VSRTNPNSGDFRFSLEINVNR-----TSGNPSMPSLEQSSEMPGAEDMEVSSQGENEN---EPEP 187
Frog 188 VAPRVAQ---AEVTEEAPVQRGQRRARSRSPDQRRTRARTDRSRSPLHQAVEPPIRRAQHSSSQT 249
Frog 250 VDASSTEEAEGSSRTRHHVSSQMQNSSSSNETEGSSRTRQHITARQQALGTE-------GQSQSQ 307
Frog 308 TQTQSQSQTQTQSQTQSQSTVHLSNPESRSSSQPPQTDSSSNAETTGTGQRPPTIVLDLQVRRVR 372
Frog 373 PGDYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGL 437
Frog 438 SETTSVAIQTMLRQIMTGFGELSYFMYNDNDTDPNNPTPVSPPAAVP------------------ 484
Frog 485 GEAQNLVSPEPPAPIVEPPEPVAPVESEEGSNVSTSS--ARREGRNSRGGVTFEESGSLPFLSLA 547
Frog 548 QFFLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCI 612
Frog 613 DRWLSENSTCPICRRAVLVAGNRESIV 639 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rlim | NP_001016091.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..28 | 17/26 (65%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 67..403 | 188/353 (53%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 467..534 | 19/86 (22%) | |||
| zf-RING_2 | 584..626 | CDD:290367 | 41/41 (100%) | ||
| PDZ-binding. /evidence=ECO:0000255 | 636..639 | 2/2 (100%) | |||
| Rlim | NP_001345134.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..24 | 14/23 (61%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 49..355 | 205/372 (55%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 417..497 | 21/88 (24%) | |||
| RING_Ubox | 544..588 | CDD:388418 | 43/43 (100%) | ||
| PDZ-binding. /evidence=ECO:0000255 | 597..600 | 2/2 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 619 | 1.000 | Domainoid score | I2183 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H7920 | |
| Inparanoid | 1 | 1.050 | 736 | 1.000 | Inparanoid score | I4917 |
| OMA | 1 | 1.010 | - | - | QHG40698 | |
| OrthoDB | 1 | 1.010 | - | - | D127162at32523 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0008409 | |
| OrthoInspector | 1 | 1.000 | - | - | otm60892 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR45931 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2338 |
| SonicParanoid | 1 | 1.000 | - | - | X7542 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 12 | 12.110 | |||||