DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TOR4A and RPT3

DIOPT Version :9

Sequence 1:NP_060193.2 Gene:TOR4A / 54863 HGNCID:25981 Length:423 Species:Homo sapiens
Sequence 2:NP_010682.3 Gene:RPT3 / 852003 SGDID:S000002802 Length:428 Species:Saccharomyces cerevisiae


Alignment Length:352 Identity:63/352 - (17%)
Similarity:118/352 - (33%) Gaps:99/352 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    78 TFDSPAELPSRTPRKKRRRSRLV--LYPETSRKYRPRVEHRSRAQRCLLLLVAIVGFQVLNAIEN 140
            |.|.....||.:....|..:.||  |.|::...                  ::::|       ||
Yeast   125 TLDRELLKPSMSVALHRHSNALVDILPPDSDSS------------------ISVMG-------EN 164

Human   141 LDDNAQRYDLDGLEKALQRAVFGQPAAVSRIVALMRDYLATHVHSRPLLLALHGPSGVGKSHVGR 205
            ...:....|:.||:  :|:....:...:..:.|.:.:.:..   ..|..:.|:||.|.||:.:.:
Yeast   165 EKPDVTYADVGGLD--MQKQEIREAVELPLVQADLYEQIGI---DPPRGVLLYGPPGTGKTMLVK 224

Human   206 LLARHFRSV---LEDSALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAEEKTPLLVLDD 267
            .:|...::.   :..|..|.:|..               |..|.|.||. |...|....::.:|:
Yeast   225 AVANSTKAAFIRVNGSEFVHKYLG---------------EGPRMVRDVF-RLARENAPSIIFIDE 273

Human   268 VELMPRPLLDELHGFLQPQRSHHFHNAIYVLLSGAGGAEVTRFVLQNASRALPLRPDGFRSAEAA 332
            |:.:.....|...|                     ...||.|.:::     |..:.|||      
Yeast   274 VDSIATKRFDAQTG---------------------SDREVQRILIE-----LLTQMDGF------ 306

Human   333 AAQAEEDLRASLLAVLSREHPLWQAAAIVPFLL----LDKRDVVSCFRDEMAGEGFFPDQARAEN 393
                ::.....::...:|      |..:.|.||    ||::......||.......|...|...:
Yeast   307 ----DQSTNVKVIMATNR------ADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMS 361

Human   394 LAAQLSFYRVAGREFAVTGCKQVVATV 420
            ||.:.....:..|..:::|.  |:|.:
Yeast   362 LAPEADLDSLIIRNDSLSGA--VIAAI 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TOR4ANP_060193.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..68
P-loop_NTPase 149..253 CDD:304359 21/106 (20%)
AAA 186..>290 CDD:214640 22/106 (21%)
RPT3NP_010682.3 PTZ00454 46..428 CDD:240423 63/352 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.