DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSMCE4A and Nse4

DIOPT Version :10

Sequence 1:NP_060085.2 Gene:NSMCE4A / 54780 HGNCID:25935 Length:385 Species:Homo sapiens
Sequence 2:NP_609405.2 Gene:Nse4 / 34434 FlyBaseID:FBgn0032251 Length:290 Species:Drosophila melanogaster


Alignment Length:321 Identity:69/321 - (21%)
Similarity:140/321 - (43%) Gaps:53/321 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    68 MDPASLEAEADQGLCRQIRHQYRALINSVQQN---REDILN--AGDKLTEVLEEANTLFNEVSRA 127
            ||.:..:::.|....|.:|.|     |.:::|   .:.|.|  .|:.:| .:||.....|::|:.
  Fly     1 MDSSESQSQMDDQDARILRLQ-----NLIEKNIEIEQQIENNTIGESIT-AIEEIIQTANDISKG 59

Human   128 RE-AVLDAHFLVLASDLGKE------KAKQLRSDLSSFDMLRYVETLLTHMGVNPLEAEELIRDE 185
            .| ...::..|||.::|.:.      ||.|..::::.    |.|.|.:          .:|:..|
  Fly    60 HEDRRTNSTELVLDTELLRRNFEVVGKAIQHNTNVTD----RMVATAI----------NDLVFKE 110

Human   186 DSPDFEFIVYDSWKITGRTAENTFNKTHTFHFLLGSIYGECPVPKPRVDRPRKVPVIQEERAMPA 250
            ...|::.:.    .:..:.....|.......|:  .:..:..|.|.|..|..|..|.::......
  Fly   111 SEEDWDALC----SLAIQFGRPLFTNDSMLPFI--DVTPKVVVQKQRAPRKTKSQVDEKRPEKSD 169

Human   251 QLRRMEESHQEATE--KEVERILGLLQTYFREDPDTPMSFFDFVVDPHSFPRTVENIFHVSFIIR 313
            ||.|.:|.....|.  |::.:|       :|:....|:.:|..:.:|::|..||:|...:||:::
  Fly   170 QLERKDEGAASVTHMLKQIRQI-------YRDGNQEPIPYFKLICNPNNFMDTVQNALQLSFLVK 227

Human   314 DGFARIRLDQDRLPVIEPVSINEENEGFEHNTQVRNQGIIALSYRDWEEIVKTFEISEPVI 374
            :.:..|...:|.||::..|:    ::..|.|..  :|.|.::.....|::||.:.:.||::
  Fly   228 ENYISIENGEDGLPLVRVVN----SKSVEGNAP--SQAICSIDVTFCEKMVKHYNLHEPML 282

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity