DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB39A and Rab10

DIOPT Version :10

Sequence 1:NP_059986.1 Gene:RAB39A / 54734 HGNCID:16521 Length:217 Species:Homo sapiens
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:173 Identity:74/173 - (42%)
Similarity:113/173 - (65%) Gaps:14/173 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     9 FRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQE 73
            |:|::||||.|||:|:|.||:...|    :.....|:|:||..:.:|:. ||:||||:|||||||
  Fly    10 FKLLLIGDSGVGKTCILFRFSDDAF----TSTFISTIGIDFKIKTVELR-GKKIKLQIWDTAGQE 69

Human    74 RFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWL----EEAKMYVQPFRIVFLLVGHKCDLASQ 134
            ||.:||.||||.::|..||:||||.:|||::..||    |.|...|:.     :::|:|||:..:
  Fly    70 RFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEK-----MILGNKCDMTDK 129

Human   135 RQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYE 177
            |.|.:|..|.::.:.|::::|||||...|:|.:|..|...|.:
  Fly   130 RVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILD 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB39ANP_059986.1 Rab39 7..217 CDD:133311 74/173 (43%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 39..47 1/7 (14%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 71..87 11/15 (73%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 74/173 (43%)

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