DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2al2c and His2A:CG33823

DIOPT Version :9

Sequence 1:NP_001171040.1 Gene:H2al2c / 547210 MGIID:3779546 Length:111 Species:Mus musculus
Sequence 2:NP_001027316.1 Gene:His2A:CG33823 / 3771783 FlyBaseID:FBgn0053823 Length:124 Species:Drosophila melanogaster


Alignment Length:106 Identity:39/106 - (36%)
Similarity:57/106 - (53%) Gaps:10/106 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse    14 THSQRAELQFPVSRVDRFLGEGIYSRRLSSSALVFLVGVLEYLTPNILGLAGEVTHTSGMKRIAP 78
            :.|.||.|||||.|:.|.|.:|.|:.|:.:.|.|:|..|:|||...:|.|||.....:...||.|
  Fly    16 SRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 80

Mouse    79 EHVCQVVQNKEQLHQLFK-----QGGT-----SVFEPPEPE 109
            .|:...::|.|:|::|..     |||.     :|..|.:.|
  Fly    81 RHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2al2cNP_001171040.1 H2A 12..99 CDD:305064 34/89 (38%)
His2A:CG33823NP_001027316.1 PTZ00017 16..124 CDD:185399 39/106 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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