DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fezf2 and cg

DIOPT Version :9

Sequence 1:NP_536681.2 Gene:Fezf2 / 54713 MGIID:1859823 Length:455 Species:Mus musculus
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:239 Identity:80/239 - (33%)
Similarity:116/239 - (48%) Gaps:27/239 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse   239 QVLKENSALTAERGGVKSHSKLPGGSTDSKPKN--------------------FTCEVCGKVFNA 283
            |.|::|.    :..|...:.||..|:.:..||.                    ::|:.|||.|..
  Fly   243 QGLEDNE----DSQGEAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLL 303

Mouse   284 HYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIR 348
            .::||.|..||||.||.:|..|||.|.....|..|.::|:.|:|::|.:|.|:|.....|.||.|
  Fly   304 KHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSR 368

Mouse   349 IHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKKPFT 413
            :|:..:||||:.||:.|..|.:...|...|:||:.|.|..|.::|.|..:|..|...|....||.
  Fly   369 VHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFV 433

Mouse   414 CATCGKGFCRNFDLKKHVRKLHDSVGPTATPSAKDL--ARTVQS 455
            ||.||..|.|.|.|..|.| :|..:..:.|...|:.  .||:.|
  Fly   434 CAECGASFPRKFQLVNHGR-IHGKIPHSCTVCGKEFLQKRTLVS 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fezf2NP_536681.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Engrailed homology 1 repressor 27..42
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
COG5048 <284..>390 CDD:227381 42/105 (40%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
zf-H2C2_2 317..339 CDD:404364 8/21 (38%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
SFP1 <380..436 CDD:227516 22/55 (40%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
C2H2 Zn finger 414..432 CDD:275368 9/17 (53%)
cgNP_001097306.2 COG5048 287..>371 CDD:227381 32/83 (39%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
zf-H2C2_2 306..331 CDD:290200 14/24 (58%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
zf-H2C2_2 362..385 CDD:290200 11/22 (50%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
zf-H2C2_2 390..415 CDD:290200 8/24 (33%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
SIR2 <425..>465 CDD:294129 15/40 (38%)
C2H2 Zn finger 434..454 CDD:275368 10/20 (50%)
C2H2 Zn finger 461..482 CDD:275368 5/16 (31%)
C2H2 Zn finger 490..509 CDD:275368
lambda-1 491..>603 CDD:212564
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.