DRSC/TRiP Functional Genomics Resources

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Protein Alignment GTPBP2 and gtpbp2

DIOPT Version :10

Sequence 1:NP_061969.3 Gene:GTPBP2 / 54676 HGNCID:4670 Length:602 Species:Homo sapiens
Sequence 2:NP_001072714.1 Gene:gtpbp2 / 780171 XenbaseID:XB-GENE-996416 Length:584 Species:Xenopus tropicalis


Alignment Length:592 Identity:493/592 - (83%)
Similarity:532/592 - (89%) Gaps:16/592 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDSRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGCGGPKGKKK-NGRNRGGKANNPPYLPPEAE 64
            |:.||.||||    |.|           |:|.:...|..||||. .||.|..|:|||||||||||
 Frog     1 MEPRVFELFG----PAG-----------GSGGTGARGKTKGKKAGKGRGRSSKSNNPPYLPPEAE 50

Human    65 DGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHR 129
            :||||||||||||||||||||||||||||||||||||||||||||||||||:||||:|||.||||
 Frog    51 EGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLSEEEMKASLHTLHR 115

Human   130 MAEKVGADITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQ 194
            ||||||||||||||||||||||.||||||||:|||||||||||||||||||||||||||||||||
 Frog   116 MAEKVGADITVLREREVDYDSDSPRKITEVLIRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQ 180

Human   195 GELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAEEICESSSKMITFI 259
            ||||||||||||||||||||||||||||||||||||||||||:|||:|||||:||||:|||||||
 Frog   181 GELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVINYSESRTAEQICESASKMITFI 245

Human   260 DLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKIDLCAKT 324
            |||||||||.||||||||||||.|:|:||||||||||||||||||:|||||||:||||:||||..
 Frog   246 DLAGHHKYLKTTIFGLTSYCPDFAMLVVSANTGIAGTTREHLGLAMALKVPFFLVVSKVDLCAAA 310

Human   325 TVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFL 389
            |||||:|||||.||||||:|||.:|.|||||||||||||||||:||||.:|||:|||||||||||
 Frog   311 TVERTLRQLERTLKQPGCNKVPFMVRSEDDAVTAAQQFAQSPNITPIFAISSVTGESLDLLKVFL 375

Human   390 NILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGCFLEL 454
            |||||||||.|||||||||.|||||||||||||||||||||.||:|:||:.|||||||.|.||.|
 Frog   376 NILPPLTNSHEQEELMQQLPEFQVDEIYTVPEVGTVVGGTLYSGVCKEGEHLVVGPTDGGGFLPL 440

Human   455 RVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTF 519
            :|||||||||.|||||||||||||||:|:|:|||||||:||||..||:|.|||||||||||||:.
 Frog   441 KVCSIQRNRSTCRVLRAGQAATLALGEFERSLLRKGMVLVSPEALPTVCWVFEAEIVLLFHATSC 505

Human   520 RRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGH 584
            |:|.||||||||||||||:|.||.||:|||||||||||||:|||||||.|.|||||||:||||||
 Frog   506 RQGVQVTVHVGNVRQTAVLEHIHGKDELRTGEKAVVRFRFIKHPEYLKPGTKLLFREGMTKGIGH 570

Human   585 VTDVQAI 591
            |..:|.|
 Frog   571 VCSLQVI 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GTPBP2NP_061969.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..64 21/48 (44%)
GTPBP1_like 174..394 CDD:206728 196/219 (89%)
GTPBP_II 409..495 CDD:293895 70/85 (82%)
GTPBP_III 501..588 CDD:294007 71/86 (83%)
gtpbp2NP_001072714.1 GTPBP1_like 160..380 CDD:206728 196/219 (89%)
GTPBP_II 395..481 CDD:293895 70/85 (82%)
GTPBP_III 487..574 CDD:294007 71/86 (83%)

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