DRSC/TRiP Functional Genomics Resources

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Protein Alignment POU5F1B and nub

DIOPT Version :10

Sequence 1:NP_001153014.1 Gene:POU5F1B / 5462 HGNCID:9223 Length:359 Species:Homo sapiens
Sequence 2:NP_001097153.1 Gene:nub / 34669 FlyBaseID:FBgn0085424 Length:961 Species:Drosophila melanogaster


Alignment Length:220 Identity:103/220 - (46%)
Similarity:132/220 - (60%) Gaps:21/220 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    78 PQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGAVKLEKEKLEQNPEKSQDIKAL 142
            |.....|...|.|..|.|.|    |.:.:....:|:|.||...|.  .:...|.:||::.|:   
  Fly   731 PSSAASLKLSGMLTPSTPTS----GTQMSQGTTTPQPKTVASAAA--ARAAGEPSPEETTDL--- 786

Human   143 QKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQKTICRFEALQLSFKNMCKLRPLLQKW 207
             :|||||||..||:||.||:||.||||.:|.|:|..|||.||.|||||.|||||||||:||||||
  Fly   787 -EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKW 850

Human   208 VEEADNN----------ENLQEICKAETLMQARKRKRTSIENRVRGNLENLFLQCPKPTL-QISH 261
            :::||..          ..||.......::..|::||||||..:||.||..||...|||. :|:.
  Fly   851 LDDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQ 915

Human   262 IAQQLGLEKDVVRVWFCNRRQKGKR 286
            :|.:|.:||:||||||||||||.||
  Fly   916 LADRLSMEKEVVRVWFCNRRQKEKR 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU5F1BNP_001153014.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..116 8/28 (29%)
POU 138..212 CDD:197673 48/73 (66%)
Homeodomain 231..286 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..322 103/220 (47%)
nubNP_001097153.1 POU 791..855 CDD:197673 44/63 (70%)
Homeodomain 884..940 CDD:459649 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.

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