DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCNJ and CycB3

DIOPT Version :10

Sequence 1:XP_016871843.1 Gene:CCNJ / 54619 HGNCID:23434 Length:431 Species:Homo sapiens
Sequence 2:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster


Alignment Length:257 Identity:64/257 - (24%)
Similarity:108/257 - (42%) Gaps:46/257 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    45 PPGPMELEG----QW----WRGQLAADIHQALRYKELKLP--SYKGQSPQLS--LRRYFADLIAI 97
            ||.|.|:|.    .|    .....|.||...|:.:|.:.|  .|..:...|:  :|....|.:..
  Fly   282 PPVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLKVREAEFPIADYMPRQIHLTTWMRTLLVDWMVE 346

Human    98 VSNRFTLCPSARHLAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGC 162
            |...|.|.....:|||.::||::.|..|:.::|.|:..:...:|.|::|::.  |.:|....: |
  Fly   347 VQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQP--PLIEDFLYI-C 408

Human   163 MTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLY 227
            ....|    ...|:.||...|...:::|.:|.:..|:..|...|                |..:.
  Fly   409 DGAYN----HDELVRMERETLRVIKYDLGIPLSYRFLRRYARCA----------------KVPMP 453

Human   228 MAKYADYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRL--------SPTWPTRLHRLTAY 281
            ....|.|.||:||.|||.::::.|.:|:|.:.   :.||:        ..||.:.|...|.|
  Fly   454 TLTLARYILELSLMDYANISFSDSQMASAALF---MALRMHGGPGQLDKQTWTSTLIYYTGY 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCNJXP_016871843.1 CYCLIN_CCNJ-like_rpt1 82..188 CDD:410231 26/107 (24%)
CYCLIN_CCNJ-like_rpt2 193..293 CDD:410232 24/97 (25%)
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 34/147 (23%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 24/97 (25%)

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