DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATRX and ISW2

DIOPT Version :10

Sequence 1:NP_000480.3 Gene:ATRX / 546 HGNCID:886 Length:2492 Species:Homo sapiens
Sequence 2:NP_014948.1 Gene:ISW2 / 854480 SGDID:S000005831 Length:1120 Species:Saccharomyces cerevisiae


Alignment Length:1246 Identity:271/1246 - (21%)
Similarity:452/1246 - (36%) Gaps:408/1246 - (32%)


- Green bases have known domain annotations that are detailed below.


Human  1346 TVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSE---DSDFQESGVSEEVSESE---DEQRPRT 1404
            |..:.:..:.|.:|.:...||      .|.:.||:   .||....|.|||:|:.|   .|.||  
Yeast     3 TQQEEQRSDTKNSKSESPSEV------LVDTLDSKSNGSSDDDNIGQSEELSDKEIYTVEDRP-- 59

Human  1405 RSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDD 1469
                       ...:.|:||:..:.|                          :.:..:::|::|.
Yeast    60 -----------PEYWAQRKKKFVLDV--------------------------DPKYAKQKDKSDT 87

Human  1470 SKS-----------------PGKGRKKIRKILK---DDKLRTETQNALKEEEERRKRIAERERER 1514
            .|.                 ..|..|.|:|:||   .|..:....::......|..|..|:|   
Yeast    88 YKRFKYLLGVTDLFRHFIGIKAKHDKNIQKLLKQLDSDANKLSKSHSTVSSSSRHHRKTEKE--- 149

Human  1515 EKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVI-----------KLKPHQVDGV 1568
                     |||         :|:.||:||    :|..::..:.           ||:.:||.|:
Yeast   150 ---------EDA---------ELMADEEEE----IVDTYQEDIFVSESPSFVKSGKLRDYQVQGL 192

Human  1569 QFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALN 1633
            .::     .|:.:.|.|.    |||..||||||||.:|||..:....::: ...|::.|.:|..|
Yeast   193 NWL-----ISLHENKLSG----ILADEMGLGKTLQTISFLGYLRYVKQIE-GPFLIIVPKSTLDN 247

Human  1634 WMNEFEKWQEGLK-------DDEKLEVSELATVKRPQERSYMLQ-RWQEDGGVMIIGYEMYRNLA 1690
            |..||.||...:.       .|.:.::          .|:.:|: |:.    |:|..|||   :.
Yeast   248 WRREFLKWTPNVNVLVLHGDKDTRADI----------VRNIILEARFD----VLITSYEM---VI 295

Human  1691 QGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNL 1755
            :.:|...|...:            ::|.||.|.:|||.||:|:.:....|:.|:::|||||||||
Yeast   296 REKNALKRLAWQ------------YIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNL 348

Human  1756 IEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDY 1820
            .|...::||:..::.|..:.|...|   .||....|..:|        ...|:.:|...:.|:..
Yeast   349 HELWALLNFLLPDIFGDSELFDEWF---EQNNSEQDQEIV--------IQQLHSVLNPFLLRRVK 402

Human  1821 TALTKFLPPKHEYVLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGR-GKAGAKLFQDFQMLSRIWT 1884
            ..:.|.|.||.|..:.|.||.:|.:.|:..|:......|.:.|.| ||  .:|......|.:...
Yeast   403 ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGK--TRLLNIVMQLRKCCN 465

Human  1885 HPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKKGKKGKKDSSSSGSGSD 1949
            ||:..:                                                           
Yeast   466 HPYLFE----------------------------------------------------------- 471

Human  1950 NDVEVIKVWNSRSRGGGEGNVDETGNNPSVSLKLEESKATSSSNPSSPAPDWYKDFVTDADAEVL 2014
                           |.|                             |.|.:      ..|..::
Yeast   472 ---------------GAE-----------------------------PGPPY------TTDEHLI 486

Human  2015 EHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLR 2079
            .:||||::|.::|:..:|.|.:||:|||....||::||:.                      :.|
Yeast   487 FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYC----------------------YFR 529

Human  2080 NIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYD 2144
            :.:|.|:||||:.:.|.:..:|:| :.|....:|:::|:||.||||||.|:.||:||:.|||..|
Yeast   530 DFEYCRIDGSTSHEERIEAIDEYN-KPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQAD 593

Human  2145 IQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYT 2209
            :|::.|.:|.||.|.|:||||:.:..:|:|:.:|...|..|...|:.|.      |..:...|..
Yeast   594 LQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG------TGKKTASLGN 652

Human  2210 FEPDLLD------DPNSEKKKKRDTPMLPKDTILAE----------------LLQIHK----EHI 2248
            .:.||||      ....|||..:.|.....|.||.:                |..:.|    |:.
Yeast   653 SKDDLLDMIQFGAKNMFEKKASKVTVDADIDDILKKGEQKTQELNAKYQSLGLDDLQKFNGIENQ 717

Human  2249 VGYHEHDSLLDHKEEEELTE------EERKAAWAEYEAE----------KKGLTMRFNIPTGTNL 2297
            ..|..:......|..:::.|      .||:.....|..:          .|..:.:...|.....
Yeast   718 SAYEWNGKSFQKKSNDKVVEWINPSRRERRREQTTYSVDDYYKEIIGGGSKSASKQTPQPKAPRA 782

Human  2298 PPVSFNSQTPYIPFNLGALSA-------------------------------------------- 2318
            |.|.......:.|..|.||..                                            
Yeast   783 PKVIHGQDFQFFPKELDALQEKEQLYFKKKVNYKVTSYDITGDIRNEGSDAEEEEGEYKNAANTE 847

Human  2319 --MSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQE 2381
              ..:::|:..|.:.:||:..|.:......::..|.|..|....|.....|.:.|.|...:...|
Yeast   848 GHKGHEELKRRIEEEQEKINSAPDFTQEDELRKQELISKAFTNWNKRDFMAFINACAKYGRDDME 912

Human  2382 -----LDVKRRE--AIYNDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQMTYQQA-------T 2432
                 :|.|..|  .:|..:..::...|:..::.|.|..|.::.|::.:.|.|..:.       .
Yeast   913 NIKKSIDSKTPEEVEVYAKIFWERLKEINGWEKYLHNVELGEKKNEKLKFQETLLRQKIEQCKHP 977

Human  2433 LGHLMMPKPPN 2443
            |..|::..|||
Yeast   978 LHELIIQYPPN 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATRXNP_000480.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..147
ADDz_ATRX 167..270 CDD:277252
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..516
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 535..576
PxVxL motif 581..594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 593..616
PTZ00108 <642..857 CDD:240271
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..956
PTZ00121 <791..1438 CDD:173412 23/97 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 968..1479 27/155 (17%)
Interaction with DAXX 1189..1326
HepA <1543..2191 CDD:440319 168/667 (25%)
DEXHc_ATRX 1560..1803 CDD:350826 72/250 (29%)
DEGH box 1719..1722 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1913..2000 3/86 (3%)
Interaction with MECP2. /evidence=ECO:0000269|PubMed:17296936 2010..2280 88/301 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2462..2492
ISW2NP_014948.1 PLN03142 1..1093 CDD:215601 271/1246 (22%)
Blue background indicates that the domain is not in the aligned region.

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