DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATRX and RAD26

DIOPT Version :9

Sequence 1:NP_000480.3 Gene:ATRX / 546 HGNCID:886 Length:2492 Species:Homo sapiens
Sequence 2:NP_012569.1 Gene:RAD26 / 853492 SGDID:S000003796 Length:1085 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATRXNP_000480.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..146
ADDz_ATRX 167..270 CDD:277252
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..516
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 535..576
PxVxL motif 581..594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 593..614
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..956
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 968..1479
Interaction with DAXX 1189..1326
SNF2_N 1563..1889 CDD:278600
DEXDc 1588..1750 CDD:238005
DEGH box 1719..1722
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1913..2000
Interaction with MECP2. /evidence=ECO:0000269|PubMed:17296936 2010..2280
HELICc 2017..2163 CDD:238034
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2462..2492
RAD26NP_012569.1 HepA 2..824 CDD:223627
DEXHc_ERCC6 297..517 CDD:350758
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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