DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DLL4 and dll4

DIOPT Version :9

Sequence 1:NP_061947.1 Gene:DLL4 / 54567 HGNCID:2910 Length:685 Species:Homo sapiens
Sequence 2:NP_001073304.1 Gene:dll4 / 563920 ZFINID:ZDB-GENE-041014-73 Length:683 Species:Danio rerio


Alignment Length:693 Identity:390/693 - (56%)
Similarity:478/693 - (68%) Gaps:27/693 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     9 SGWALLLLVALWQ---QRAAGSGVFQLQLQEFINERGVLASGRPCEPGCRTFFRVCLKHFQAVVS 70
            :.| |..|:|.:.   .:..|||||:|.|.||.|.:|:||:|..|.|.||||||||||::|.|||
Zfish     2 AAW-LTFLIAFFTTVLTQIFGSGVFELDLHEFKNFKGLLANGNSCTPDCRTFFRVCLKNYQVVVS 65

Human    71 PGPCTFGTVSTPVLGTNSFAVRDDSSGGG--RNPLQLPFNFTWPGTFSLIIEAWHAPGDDLRPEA 133
            ||.|.||:..|||||||||.:    .|||  ..|::|||||.|||:|||||||||:|..||..:|
Zfish    66 PGDCIFGSALTPVLGTNSFRI----MGGGSFSTPIRLPFNFGWPGSFSLIIEAWHSPYSDLPVDA 126

Human   134 LPPDALISKIAIQGSLAVGQNWLLDEQTSTLTRLRYSYRVICSDNYYGDNCSRLCKKRNDHFGHY 198
            ..|:..||..|||..|.||..|..|.|:...|.||||||.||::|||||:||:.|..|:|.||||
Zfish   127 YNPNMQISFFAIQRKLEVGAEWSQDVQSGKQTELRYSYRFICNENYYGDSCSKKCTPRDDRFGHY 191

Human   199 VCQPDGNLSCLPGWTGEYCQQPICLSGCHEQNGYCSKPAECLCRPGWQGRLCNECIPHNGCRHGT 263
            .|.|||.|||||||.||||::||||.||.|.||.||||.||:||.||||:.|.||..:..|:|||
Zfish   192 TCNPDGQLSCLPGWKGEYCEEPICLEGCSEANGNCSKPGECVCREGWQGKFCTECKTYPACKHGT 256

Human   264 CSTPWQCTCDEGWGGLFCDQDLNYCTHHSPCKNGATCSNSGQRSYTCTCRPGYTGVDCELELSEC 328
            |..|.||.|.|||||||||||||:||||.||.|||||.|:||.||||.||||||||:|||::.||
Zfish   257 CHLPGQCNCKEGWGGLFCDQDLNFCTHHKPCVNGATCMNTGQGSYTCICRPGYTGVNCELQVREC 321

Human   329 DSNPCRNGGSCKDQEDGYHCLCPPGYYGLHCEHSTLSCADSPCFNGGSCRERNQGANYACECPPN 393
            ||:|.:|||.|.|.:..|.|.|.|.:.|.|||||.|:|||||||:.|.|.|::.|.:||||||..
Zfish   322 DSSPRKNGGLCTDHDKSYTCTCLPDFEGTHCEHSLLTCADSPCFHKGRCHEKDNGRSYACECPLG 386

Human   394 FTGSNCEKKVDRCTSNPCANGGQCLNRGPSRMCRCRPGFTGTYCELHVSDCARNPCAHGGTCHDL 458
            :||.|||:::|:|||..|||.|.||..|..|:|.||.||||..||::::|||.||||:||||:|.
Zfish   387 YTGLNCERRMDKCTSMLCANDGLCLILGGKRICSCRAGFTGQRCEININDCANNPCANGGTCYDR 451

Human   459 ENGLMCTCPAGFSGRRCEVRTSIDACASSPCFNRATCYTDLSTDTFVCNCPYGFVGSRCEFPVGL 523
            .|..:|:||.|:.||.|: |.|   |.|:||.|..:| ..::.:...|.||.||.|..||:....
Zfish   452 INEYVCSCPPGYKGRNCD-RPS---CLSTPCLNGGSC-VGITGNPPACFCPSGFTGPLCEYYAVT 511

Human   524 PP--------SFPWVAVSLGVGLAVLLVLLGMVAVAVRQLRLRRPDDGSR-EAMNNLSDFQKDNL 579
            .|        .|.|.||||.|||..|:|||.||.:|:|.:..:...:.:| |||||||:.|:|||
Zfish   512 APVTRGETQDRFQWAAVSLAVGLVALVVLLCMVVIALRHIHRQASGERTRGEAMNNLSESQRDNL 576

Human   580 IPAAQLKNTNQKKELEVDCGLDKSNCGKQQNHTLDYNLAPGPLGRGTMPGKFPHS-DKSLGEKAP 643
            ||.:||||||::..|||||..||||...:..| ||||.:.......:...|..|. :|.|.||.|
Zfish   577 IPTSQLKNTNKQVSLEVDCTPDKSNYIHKNCH-LDYNSSKEFKDIVSQEDKSSHKYEKCLEEKIP 640

Human   644 L-RLHSEKPECRISAICSPRDSMYQSVCLISEERNECVIATEV 685
            | |::.||||||||.|||||||:||||.:|:|||:||||||||
Zfish   641 LSRMYREKPECRISTICSPRDSVYQSVFVIAEERSECVIATEV 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DLL4NP_061947.1 MNNL 27..88 CDD:284966 40/60 (67%)
DSL 155..217 CDD:279722 39/61 (64%)
Interaction with Notch1. /evidence=ECO:0000250|UniProtKB:D3ZHH1 185..187 1/1 (100%)
Interaction with Notch1. /evidence=ECO:0000250|UniProtKB:D3ZHH1 191..195 2/3 (67%)
EGF_CA 284..322 CDD:238011 29/37 (78%)
EGF_CA 327..360 CDD:238011 16/32 (50%)
EGF_CA 403..438 CDD:238011 19/34 (56%)
EGF_CA <447..476 CDD:238011 16/28 (57%)
dll4NP_001073304.1 MNNL 22..83 CDD:284966 40/60 (67%)
DSL 148..210 CDD:279722 39/61 (64%)
EGF_CA 277..315 CDD:238011 29/37 (78%)
EGF_CA 433..468 CDD:238011 19/34 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 157 1.000 Domainoid score I16964
eggNOG 1 0.900 - - E33208_3BEE5
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10411
Inparanoid 1 1.050 821 1.000 Inparanoid score I3341
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG51332
OrthoDB 1 1.010 - - D134386at7742
OrthoFinder 1 1.000 - - FOG0002026
OrthoInspector 1 1.000 - - oto42392
orthoMCL 1 0.900 - - OOG6_104568
Panther 1 1.100 - - LDO PTHR24044
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1332
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1717.340

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