DRSC/TRiP Functional Genomics Resources

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Protein Alignment POU3F4 and pdm2

DIOPT Version :10

Sequence 1:NP_000298.3 Gene:POU3F4 / 5456 HGNCID:9217 Length:361 Species:Homo sapiens
Sequence 2:NP_723763.1 Gene:pdm2 / 34673 FlyBaseID:FBgn0004394 Length:893 Species:Drosophila melanogaster


Alignment Length:346 Identity:142/346 - (41%)
Similarity:173/346 - (50%) Gaps:100/346 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    25 MQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTSLSDGGPWSSTLATSPLDQQDVKPGREDLQ 89
            :|..:.|:..|::.|......:||                  :|:.||.|||....:.|      
  Fly   575 LQALAQFQALQQMKQQQREDPLPS------------------YSTPLAKSPLRSPSLSP------ 615

Human    90 LGAIIHHRSPHVAHHS-------PHTNHPNAWGASPA---PN-PSITSSGQPLNVYSQPGFTVSG 143
                       |..||       |::...|:.|.|.|   || ||:..  ||....|.|..|   
  Fly   616 -----------VPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQQ--QPQLQQSTPKPT--- 664

Human   144 MLEHGGLTPPPAAASAQSLHPVLREPPDHGELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKL 208
                .|||...|.|..                      :.|.|||...:|||||||.||||||||
  Fly   665 ----SGLTVASAMAKL----------------------EQSPEETTDLEELEQFAKTFKQRRIKL 703

Human   209 GFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSS----------- 262
            ||||.|||||:|.||||.||||||.|||||.|||||||||||||.||||:|||:           
  Fly   704 GFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNI 768

Human   263 -------TGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKE 320
                   :.:|.||     .||:||||||||.:|:..||..||...||.::|||.|::.|.::||
  Fly   769 NTMTSTLSSTPESI-----LGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKE 828

Human   321 VVRVWFCNRRQKEKRMTPPGD 341
            |:|||||||||||||:.|..|
  Fly   829 VIRVWFCNRRQKEKRINPSLD 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU3F4NP_000298.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 99..131 13/42 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..192 9/47 (19%)
POU 186..260 CDD:197673 60/73 (82%)
Homeodomain 279..335 CDD:459649 34/55 (62%)
pdm2NP_723763.1 PHA03247 <375..675 CDD:223021 34/143 (24%)
POU 691..755 CDD:197673 54/63 (86%)
Homeodomain 787..843 CDD:459649 34/55 (62%)

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