DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POU3F3 and Antp

DIOPT Version :9

Sequence 1:NP_006227.1 Gene:POU3F3 / 5455 HGNCID:9216 Length:500 Species:Homo sapiens
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:423 Identity:82/423 - (19%)
Similarity:119/423 - (28%) Gaps:151/423 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    86 NGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSPQQPPQPPPPPPQGPDVK 150
            ||..|.......|.:.|.:.::.........:.:        |..|.|||..|....|.|....:
  Fly    70 NGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTN--------GQLGVPQQQQQQQQQPSQNQQQQ 126

Human   151 GGAGRDDLHAGTALHHRGPPHLGPPPPPPHQ--GHPGGWGAAAAAAAAAAAAAAAAHLPSMAGGQ 213
            ..             .:.|..|....|...|  .||..........|:....||...|..:..|.
  Fly   127 QA-------------QQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGG 178

Human   214 QPPPQSLLYSQPGGFTVNGMLSAPPGPGGGGGGAGGGAQSLVHPGLVRGDT----PELAEHHHHH 274
            .||    |..|..|..:|..::.|...|              ||....|.|    |::.|.|.:|
  Fly   179 SPP----LVDQMSGHHMNAQMTLPHHMG--------------HPQAQLGYTDVGVPDVTEVHQNH 225

Human   275 HHHAHPH----------PPH--PHHAQGPP--HHGGGGGGAGPGLNSHDPHSDEDTPTSDDL-EQ 324
            |:.....          ||.  .|..||||  |.|..|....|..|.:...|...:|....: .|
  Fly   226 HNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQ 290

Human   325 FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADS 389
            |.|..:::|                      .:.|..|::.|:|                     
  Fly   291 FGKCQERKR----------------------GRQTYTRYQTLEL--------------------- 312

Human   390 STGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWF 454
                    :|.....|...:|..||:                        |.:|.|.:..:::||
  Fly   313 --------EKEFHFNRYLTRRRRIEI------------------------AHALCLTERQIKIWF 345

Human   455 CNRRQKEKR----------------MTPPGIQQ 471
            .|||.|.|:                :|||...|
  Fly   346 QNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU3F3NP_006227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..190 14/69 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..319 26/105 (25%)
POU 314..388 CDD:197673 9/74 (12%)
Homeobox 409..463 CDD:395001 12/53 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..500 5/27 (19%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 40/184 (22%)
Homeobox 301..354 CDD:395001 18/105 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.