DRSC/TRiP Functional Genomics Resources

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Protein Alignment SDK2 and DIP-gamma

DIOPT Version :9

Sequence 1:NP_001138424.1 Gene:SDK2 / 54549 HGNCID:19308 Length:2172 Species:Homo sapiens
Sequence 2:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster


Alignment Length:385 Identity:96/385 - (24%)
Similarity:144/385 - (37%) Gaps:93/385 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   164 LENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVA 228
            |::||.::..:|...|     :.:.:|..:::|..:           || .|..|....|.:..|
  Fly     5 LQSTLFVILIMATKCG-----SGSTQNQHHESSSQL-----------DP-DPEFIGFINNVTYPA 52

Human   229 GTSEVTLECVANARPLIKLHIIWKKDG----VLLSGGISDHNRRLTIPNP------------TGS 277
            | .|..|.|  :.|.|.|..:.|.:..    :.|.|.:..||.|:::.:.            ..|
  Fly    53 G-REAILAC--SVRNLGKNKVGWLRASDQTVLALQGRVVTHNARISVMHQDMHTWKLKISKLRES 114

Human   278 DAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVKEPERHITAEME-KVVDIPCQAKGVPPPSIT 341
            |.|.|.|:.    ::.|...:...:.|..||..:.|......|..| :...:.|:|.|.|.|.:|
  Fly   115 DRGCYMCQI----NTSPMKKQVGCIDVQVPPDIINEESSADLAVQEGEDATLTCKATGNPQPRVT 175

Human   342 WYK-DAAVVEVEK-----LTRFRQRNDGGLQISGLVPDDTGMFQCFARN-----AAGEVQTSTYL 395
            |.: |..::.:.|     |.:....|...|::..|.....|.:.|.|.|     .:..|..|...
  Fly   176 WRREDGEMILIRKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQF 240

Human   396 AVTSIAPNITRG-PLDSTVIDGMSVVLACETSGAPRPAITWQKGERI---LASGSVQLPRFTPLE 456
            |....||:...| ||      |..|.|.|:...:|.|...|.||.|.   .||.|.     ..||
  Fly   241 APMVRAPSQLLGTPL------GSDVQLECQVEASPSPVSYWLKGARTSNGFASVST-----ASLE 294

Human   457 SGS-----LLISPTH---------------------ISDAGTYTCLATNSRGVDEASADL 490
            |||     ||..|.:                     .||.|||.|::|||.|..|.:..|
  Fly   295 SGSPGPEMLLDGPKYGITERRDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLGRAEGTLRL 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SDK2NP_001138424.1 Ig 27..109 CDD:299845
IG_like 40..109 CDD:214653
I-set 120..203 CDD:254352 7/38 (18%)
Ig 132..210 CDD:299845 7/45 (16%)
IG_like 222..304 CDD:214653 21/97 (22%)
IGc2 233..286 CDD:197706 16/68 (24%)
I-set 308..397 CDD:254352 23/100 (23%)
Ig 326..394 CDD:143165 19/78 (24%)
I-set 402..492 CDD:254352 37/119 (31%)
Ig 416..492 CDD:299845 33/104 (32%)
Ig 502..586 CDD:299845
IG_like 502..586 CDD:214653
FN3 590..681 CDD:238020
FN3 693..786 CDD:238020
FN3 794..890 CDD:238020
FN3 895..983 CDD:238020
FN3 993..1087 CDD:238020
FN3 1099..1194 CDD:238020
FN3 1201..1290 CDD:238020
FN3 1301..1394 CDD:238020
FN3 1400..1484 CDD:238020
FN3 1503..1616 CDD:238020
FN3 1626..1719 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1707..1729
FN3 1724..1805 CDD:238020
FN3 1837..1916 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2067
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2098..2172
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2166..2172
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 22/98 (22%)
Ig 47..129 CDD:299845 21/88 (24%)
Ig 140..238 CDD:299845 23/97 (24%)
IG_like 247..355 CDD:214653 37/119 (31%)
Ig 256..351 CDD:299845 32/99 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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