DRSC/TRiP Functional Genomics Resources

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Protein Alignment SDK2 and DIP-eta

DIOPT Version :9

Sequence 1:NP_001138424.1 Gene:SDK2 / 54549 HGNCID:19308 Length:2172 Species:Homo sapiens
Sequence 2:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster


Alignment Length:395 Identity:92/395 - (23%)
Similarity:154/395 - (38%) Gaps:85/395 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   204 ENVGGPADPIAPTIIIPPKNTSVVAGTS-----EVTLECVA-NARP--------------LIKLH 248
            :.|..||:     :|:.||.:|.:...:     :..|.||. :..|              .|:.|
  Fly    31 QRVEVPAE-----VIVDPKFSSPIVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNH 90

Human   249 IIWKKDGVLLSGGISDHNR-RLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQFVK 312
            :|.|...:.::.  |:|.. .:.|.:...||.|:|.|:.    ::.|...:..||.|:.||..:.
  Fly    91 VITKNQRIGIAN--SEHKTWTMRIKDIKESDKGWYMCQI----NTDPMKSQMGYLDVVVPPDILD 149

Human   313 EP-ERHITAEMEKVVDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISG---LVPD 373
            .| ...:.......|.:.|.|.|.|.|:|||.:::. |.:|..|     .:..:.|.|   ::|:
  Fly   150 YPTSTDMVVREGSNVTLKCAATGSPEPTITWRRESG-VPIELAT-----GEEVMSIEGTDLVIPN 208

Human   374 ----DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLACETSGAPRPAIT 434
                ..|.:.|.|.|......:.....|....|.||........::|..|.|.||:...|:....
  Fly   209 VRRHHMGAYLCIASNGVPPSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSINY 273

Human   435 W--QKGERILASGSVQLPRFTPL----ESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW 493
            |  ::|| |:..|.......|.:    .|..|.|:|...::.|:|.|:|.||.|..:.:..|.  
  Fly   274 WTRERGE-IVPPGGKYSANVTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLGDTDGTIKLY-- 335

Human   494 ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTESHPRIRLDRNGSLHISQ 558
               ||  ||...:.::..:|              |:..:|  .|..:|||...|         :|
  Fly   336 ---RI--PPNAVNYVENFEA--------------RHKGKK--RTKSSESHHPAR---------AQ 370

Human   559 TWSGD 563
            ..||:
  Fly   371 EHSGE 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SDK2NP_001138424.1 Ig 27..109 CDD:299845
IG_like 40..109 CDD:214653
I-set 120..203 CDD:254352
Ig 132..210 CDD:299845 1/5 (20%)
IG_like 222..304 CDD:214653 21/102 (21%)
IGc2 233..286 CDD:197706 16/68 (24%)
I-set 308..397 CDD:254352 21/96 (22%)
Ig 326..394 CDD:143165 19/74 (26%)
I-set 402..492 CDD:254352 27/95 (28%)
Ig 416..492 CDD:299845 24/81 (30%)
Ig 502..586 CDD:299845 12/62 (19%)
IG_like 502..586 CDD:214653 12/62 (19%)
FN3 590..681 CDD:238020
FN3 693..786 CDD:238020
FN3 794..890 CDD:238020
FN3 895..983 CDD:238020
FN3 993..1087 CDD:238020
FN3 1099..1194 CDD:238020
FN3 1201..1290 CDD:238020
FN3 1301..1394 CDD:238020
FN3 1400..1484 CDD:238020
FN3 1503..1616 CDD:238020
FN3 1626..1719 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1707..1729
FN3 1724..1805 CDD:238020
FN3 1837..1916 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2067
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2098..2172
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2166..2172
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 19/95 (20%)
IG_like 51..137 CDD:214653 17/91 (19%)
IG_like 153..237 CDD:214653 19/89 (21%)
Ig 161..224 CDD:299845 18/68 (26%)
IG_like 252..335 CDD:214653 23/83 (28%)
Ig 258..333 CDD:143165 22/75 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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