DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SDK2 and bdl

DIOPT Version :9

Sequence 1:NP_001138424.1 Gene:SDK2 / 54549 HGNCID:19308 Length:2172 Species:Homo sapiens
Sequence 2:NP_608822.1 Gene:bdl / 33635 FlyBaseID:FBgn0028482 Length:719 Species:Drosophila melanogaster


Alignment Length:562 Identity:139/562 - (24%)
Similarity:210/562 - (37%) Gaps:89/562 - (15%)


- Green bases have known domain annotations that are detailed below.


Human   277 SDAGYYECEAVLRSSSVPSVVRG--AYLSVLEPPQFVKEPERHITAEMEKVVDIPCQAKGVPPPS 339
            ||.|:|.|:....:.| |||...  ||...::....::.|..:.|....:.....|..|......
  Fly   118 SDQGWYHCQVSFPN
RS-PSVRNNGTAYHLAVQGGSLIRIPPVNQTIREGQTAFFHCVMKHPENSQ 181

Human   340 ITWYKDAAVV-EVEKLT-RFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAP 402
            .:||||..:: ||:.|. ||....||.|.|...:..|.|.::|..||:.||:||:..........
  Fly   182 ASWYKDGVLLQEVQDLVRRFYMGPDGSLSIDPTMMSDLGEYECKVRNSDGELQTAKAFLNI
QYKA 246

Human   403 NITRGPLDSTVIDGMSVVLACE-TSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTH 466
            .:...|.:..:..|...||.|. .:..|...:.|:|..  |...|..:|......:|||..:...
  Fly   247 KVIYAPPEVFLPYGQPAVLDCHFRANPPLKNLRWEKDG--LLFDSYNVPGVFYKMNGSLFFAKVD 309

Human   467 ISDAGTYTCLATNSRGVDEASADLVVWARTRITKPPQDQSVIK-------GTQASMVC-GVTHDP 523
            .:.||:|||...|..|.|..|..:.|    .:.:||......|       |..|.:.| .:..|.
  Fly   310 ENHAGSYTCTPYNDLGTDGPSPVISV----IVLRPPIFSVTPKAIYIQKLGEAAELPCEAIDRDG 370

Human   524 RVTIRYIW-EKDGATLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVR 587
            ......|| .|||..|..:   |..|. .|:|.|:....||.|.|.|...:.....:..|.|.:.
  Fly   371 NNRPSIIWGRKDGQPLPAD---RFSLS-GGNLTITGLVEGDRGIYECSATNEAATITAEAELMIE 431

Human   588 QLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTV 652
            .:  ||..|....:......|.:.|...:  ..|.:.|.:......||....|..:|.|....||
  Fly   432 NI--APRAPYNLTANSTETCITIRWQPGY--LRPNLEYTVWYRLMEAPEWRTLRVLDKKVMEATV 492

Human   653 KGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEE----------------PPTAP------PQ 695
            :.|.|.:.|:|.:.:.:..|.|.|||.....:||..                ..|||      |.
  Fly   493 QHLQPGKEYEFMVLSQDKYGDGMFSKQFRFQTLPSPIRADDFDAQQLQHDLGQVTAPAGGLGAPW 557

Human   696 NVIASGRTNQSIMIQWQPPPESHQNGILKGYIIR------YCLAG----LPVGYQFKNITDADVN 750
            |:.|.. ..|..::.|:.|.:..:.  |:.|.:|      :.|.|    ....||.::       
  Fly   558 NLTAIS-NQQGWLLHWEHPVQGLEG--LRLYAVRWWKEPEHFLIGHAETFDNYYQLRH------- 612

Human   751 NLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPT 792
              |.||    |.::::|.|..           || |.|.||:
  Fly   613 --LKED----TLFKVQVLAVG-----------TE-TQQSVPS 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SDK2NP_001138424.1 Ig 27..109 CDD:299845
IG_like 40..109 CDD:214653
I-set 120..203 CDD:254352
Ig 132..210 CDD:299845
IG_like 222..304 CDD:214653 11/28 (39%)
IGc2 233..286 CDD:197706 5/8 (63%)
I-set 308..397 CDD:254352 26/90 (29%)
Ig 326..394 CDD:143165 24/69 (35%)
I-set 402..492 CDD:254352 23/90 (26%)
Ig 416..492 CDD:299845 22/76 (29%)
Ig 502..586 CDD:299845 24/92 (26%)
IG_like 502..586 CDD:214653 24/92 (26%)
FN3 590..681 CDD:238020 23/90 (26%)
FN3 693..786 CDD:238020 22/108 (20%)
FN3 794..890 CDD:238020
FN3 895..983 CDD:238020
FN3 993..1087 CDD:238020
FN3 1099..1194 CDD:238020
FN3 1201..1290 CDD:238020
FN3 1301..1394 CDD:238020
FN3 1400..1484 CDD:238020
FN3 1503..1616 CDD:238020
FN3 1626..1719 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1707..1729
FN3 1724..1805 CDD:238020
FN3 1837..1916 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2067
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2098..2172
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2166..2172
bdlNP_608822.1 IG_like 42..128 CDD:214653 5/9 (56%)
Ig 43..131 CDD:299845 5/12 (42%)
I-set 153..242 CDD:254352 26/88 (30%)
Ig 157..242 CDD:299845 25/84 (30%)
Ig_2 252..337 CDD:290606 24/90 (27%)
IG_like 260..327 CDD:214653 20/68 (29%)
I-set 341..428 CDD:254352 23/90 (26%)
IGc2 356..419 CDD:197706 20/66 (30%)
FN3 435..524 CDD:238020 22/90 (24%)
FN3 554..636 CDD:238020 24/109 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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