DRSC/TRiP Functional Genomics Resources

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Protein Alignment POU3F2 and pdm2

DIOPT Version :9

Sequence 1:NP_005595.2 Gene:POU3F2 / 5454 HGNCID:9215 Length:443 Species:Homo sapiens
Sequence 2:NP_001285877.1 Gene:pdm2 / 34673 FlyBaseID:FBgn0004394 Length:893 Species:Drosophila melanogaster


Alignment Length:338 Identity:139/338 - (41%)
Similarity:172/338 - (50%) Gaps:67/338 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   124 LQQQHQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPG---AWRSAAAAAHLPPSMGASN 185
            |.|...|...|.|..||.:|||::...|.:....|.:....|.   ..|.:.:....||:     
  Fly   570 LLQNSLQALAQFQALQQMKQQQREDPLPSYSTPLAKSPLRSPSLSPVPRHSKSQQRTPPN----- 629

Human   186 GGLLYSQPSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPG 250
                    |.|.|.:             |:..|...|    :.|.....|..|...|.|..|...
  Fly   630 --------SMTANSL-------------GMSSAVMTP----NTPSMQQQPQLQQSTPKPTSGLTV 669

Human   251 HPGAHHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ 315
            .........|.|:|...::||||||.||||||||||||.|||||:|.||||.||||||.|||||.
  Fly   670 ASAMAKLEQSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALN 734

Human   316 LSFKNMCKLKPLLNKWLEEADSS------------------SGSPTSIDKIAAQGRKRKKRTSIE 362
            |||||||||||||.||||:|||:                  |.:|.||     .||:||||||||
  Fly   735 LSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESI-----LGRRRKKRTSIE 794

Human   363 VSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTP------PGGTLPG 421
            .:|:..||..||...||:::||:.|::.|.::|||:|||||||||||||:.|      |.|| |.
  Fly   795 TTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLDLDSPTGT-PL 858

Human   422 AEDVYGGSRDTPP 434
            :...:|    .||
  Fly   859 SSHAFG----YPP 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU3F2NP_005595.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..171 14/49 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..267 12/65 (18%)
POU 262..336 CDD:197673 58/73 (79%)
Homeobox 357..411 CDD:395001 31/53 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..443 11/32 (34%)
pdm2NP_001285877.1 POU 691..755 CDD:197673 54/63 (86%)
Homeobox 789..842 CDD:278475 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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