DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POU3F2 and nub

DIOPT Version :9

Sequence 1:NP_005595.2 Gene:POU3F2 / 5454 HGNCID:9215 Length:443 Species:Homo sapiens
Sequence 2:NP_001097153.1 Gene:nub / 34669 FlyBaseID:FBgn0085424 Length:961 Species:Drosophila melanogaster


Alignment Length:350 Identity:147/350 - (42%)
Similarity:175/350 - (50%) Gaps:100/350 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   124 LQQQHQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHP---------GPGAWRSAAAAAHLPP 179
            :|.|.|...|..||.|..|:|||:|...|..::|.....|         .|.|.||.|::     
  Fly   655 MQSQLQALSQASQQLQALQKQQQRQVDEPLQLNHKMTQQPRSSTPHSIRSPIAIRSPASS----- 714

Human   180 SMGASNGGLLYSQPSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQ-QPP--- 240
                                       |..||||                  |.||.| .||   
  Fly   715 ---------------------------PQQLHHH------------------HHHPLQITPPSSA 734

Human   241 ----------PPPPPQGPPGHPG----------------AHHDPHSDEDTPTSDDLEQFAKQFKQ 279
                      |..|..|.....|                |..:| |.|:|...::||||||.|||
  Fly   735 ASLKLSGMLTPSTPTSGTQMSQGTTTPQPKTVASAAAARAAGEP-SPEETTDLEELEQFAKTFKQ 798

Human   280 RRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTS 344
            |||||||||.|||||:|.||||.||||||.|||||.|||||||||||||.|||::||.:..:...
  Fly   799 RRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQATGG 863

Human   345 I-DKIAAQ---------GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVR 399
            : |..|.|         ||:||||||||.:::||||..||...||:::|||.|||.|.:||||||
  Fly   864 VFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVR 928

Human   400 VWFCNRRQKEKRMTPPGGTLPGAED 424
            ||||||||||||:.|...:..||:|
  Fly   929 VWFCNRRQKEKRINPSLDSPTGADD 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU3F2NP_005595.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..171 18/55 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..267 20/95 (21%)
POU 262..336 CDD:197673 57/73 (78%)
Homeobox 357..411 CDD:395001 37/53 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..443 6/15 (40%)
nubNP_001097153.1 DUF4472 315..>399 CDD:291409
POU 791..855 CDD:197673 53/63 (84%)
Homeobox 886..939 CDD:278475 36/52 (69%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.