DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POU3F1 and vvl

DIOPT Version :10

Sequence 1:NP_002690.3 Gene:POU3F1 / 5453 HGNCID:9214 Length:451 Species:Homo sapiens
Sequence 2:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster


Alignment Length:435 Identity:203/435 - (46%)
Similarity:222/435 - (51%) Gaps:135/435 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   100 TGRADDGGGGGGFHAR-------------LVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGGH 151
            :|..|...||||:|..             :.|....||.||    :.|||..|: ||||...|  
  Fly    11 SGDLDMALGGGGYHTSSPRSAADAGEMKYMQHHHHHHAAAA----AAAHHQLPS-SPSPNGQG-- 68

Human   152 QPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHED---------------------- 194
                          .|||.||       |.|:|.|...|||.|                      
  Fly    69 --------------NGGGLGL-------GSGSGLGSWSALHPDPWMQTHHTHHLPAAAAVASAAD 112

Human   195 ------GHEAQ----LEPSPPPHLGAHG-HAHGHAHAGG----------------LHAAAA---- 228
                  .|.:|    .:....||...|. ||..:|..||                .||.||    
  Fly   113 TVKQEMSHLSQQTRIQQGMASPHAAWHAPHAGHYAPTGGSPLQYHHAMNGMLHHPAHAVAAAHHQ 177

Human   229 ----------------HLHPGAGGGGSSVGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVG 277
                            |:|...|||........:||.|:|||||.||||||||||||||||||||
  Fly   178 SVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVG 242

Human   278 LALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKK 342
            ||||||||||||||||||||||||||||||||||||.|||||.||::||||::||||||||||||
  Fly   243 LALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKK 307

Human   343 RTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPP 407
            ||||||.||||||.||.|.|||||.|||.||||||||||||||||||||||||||||....|...
  Fly   308 RTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGDM 372

Human   408 MDDVYAPGELGPGGGGASPPSAPPPPPPAALHH---HHHHTLPGS 449
            ||.:                      ||..:||   |.||.:.||
  Fly   373 MDGM----------------------PPGHMHHGGYHPHHDMHGS 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU3F1NP_002690.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..114 6/13 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..154 10/26 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..253 27/135 (20%)
POU 247..321 CDD:197673 69/73 (95%)
Homeodomain 340..396 CDD:459649 49/55 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..451 17/58 (29%)
vvlNP_001303384.1 POU 212..286 CDD:197673 69/73 (95%)
Homeodomain 305..361 CDD:459649 49/55 (89%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.